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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8500#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2682 fasta sequence
[CCTAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCCGCTACACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCACTCCTCTCCCACCTCCAGCGGGCCGCGCCCCGATCCCCTTCCCCCTGGGACCCACCGCCCCACCACCGCTTCTTCTTCTCCTCCGACGTGACCGCCGAGGGGGACAGTAAGCCGCGGCCGCCTCTTGACGGGAAGC-AGCTATGGCGCGAGGTGTCGACCTCGGAGCCCGCC-ACCGGCGCGTCGCGCCTCCCGAAGGCCACGTGGGACGCCGTGGTGGCGCTCCTCCGCCGCTTCGGCAAGGACCCGGCTATGTCCGACCAAGCCCTCGCGCTCTACATCCCCGCCTCGGCGTTCCCCACCTTAGCCCGCCGCTTCCGCCACTTCCTCCCCGCGCGCCTCTCCCTGGAGTCCGCCGAGCACCTCCTCTCCCTCCCGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCCGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGGTGAGATACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGAATGATTCAGAAGATGGTTGTGAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGC]
[+] EMBL AK073573 [CCTAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCCGCTACACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCACTCCTCTCCCACCTCCAGCGGGCCGCGCCCCGATCCCCTTCCCCCTGGGACCCACCGCCCCACCACCGCTTCTTCTTCTCCTCCGACGTGACCGCCGAGGGGGACAGTAAGCCGCGGCCGCCTCTTGACGGGAAGC AGCTATGGCGCGAGGTGTCGACCTCGGAGCCCGCC ACCGGCGCGTCGCGCCTCCCGAAGGCCACGTGGGACGCCGTGGTGGCGCTCCTCCGCCGCTTCGGCAAGGACCCGGCTATGTCCGACCAAGCCCTCGCGCTCTACATCCCCGCCTCGGCGTTCCCCACCTTAGCCCGCCGCTTCCGCCACTTCCTCCCCGCGCGCCTCTCCCTGGAGTCCGCCGAGCACCTCCTCTCCCTCCCGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCCGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGGTGAGATACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGAATGATTCAGAAGATGGTTGTGAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGC]
[-] EMBL AU065529 [ gaAAGCAAGCTATGGCGCGAGGTGTCGACCTCGGAGCCCGCCAANCGGCGCGTCGCGCCTCCCGAAGGCCACGTGGGACGCCGTGGTGGCGCTCCTCCGCCGCTTCGGCAAGGACCCGGCTATGTCCGACCAAGCCCTCGCGCTCTACATCCCCGCCTCGGCGTTCCCCACCTACGCCCGCCGCTTCCGCCACTTCCTCCCCGCGCGCCTCTCCCTGGAGTCCGCCGAGCACCTCCTCTCCCTCCCGGCCGACGANGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTT ]
consensusID : consensus_8500#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2332 fasta sequence
[AAAAAAAAAAAAAAAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCCGCTCCACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCTGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGATGAGATACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGAATGATTCAGAAGATGGTTATGAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGCGGTATAACCTTCTG]
[+] EMBL AK105401 [AAAAAAAAAAAAAAAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCCGCTCCACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCTGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGATGAGATACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGAATGATTCAGAAGATGGTTATGAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGCGGTATAACCTTCTG]
consensusID : consensus_8500#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 520 fasta sequence
[CCGTGTTCGGACGCGTGTTNCGGACGCGTGTTCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGG]
[+] EMBL AU161106 [CCGTGTTCGGACGCGTGTTNCGGACGCGTGTTCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGG]
[+] EMBL AU161105 [ gacgnGACGCGTG GGCGGACGCGTGGGCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGA TATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTG TTTCCTGATATGAACAAAGGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8500#0 CCTAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCC 60
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 GCCGCTACACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCACTCCTCTCCCACC 120
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCCAGCGGGCCGCGCCCCGATCCCCTTCCCCCTGGGACCCACCGCCCCACCACCGCTTCT 180
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCTTCTCCTCCGACGTGACCGCCGAGGGGGACAGTAAGCCGCGGCCGCCTCTTGACGGGA 240
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGCAGCTATGGCGCGAGGTGTCGACCTCGGAGCCCGCCACCGGCGCGTCGCGCCTCCCGA 300
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGGCCACGTGGGACGCCGTGGTGGCGCTCCTCCGCCGCTTCGGCAAGGACCCGGCTATGT 360
consensus_8500#1 ------------------------------------------------------------
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CCGACCAAGCCCTCGCGCTCTACATCCCCGCCTCGGCGTTCCCCACCTTAGCCCGCCGCT 420
consensus_8500#1 -AAAAAAAAAAAAAAAACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCC-ATCGCC 58
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCCGCCACTTCCTCCCCGCGCGCCTCTCCCTGGAGTCCGCCGAGCACCTCCTCTCCCTCC 480
consensus_8500#1 GCCGC-ACTCCTCCGCCGCTCCACATCCTCTCAACACCACCG-GCGCATCCTCCTCCTCC 116
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACC 540
consensus_8500#1 CGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACC 176
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGC 600
consensus_8500#1 TCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGC 236
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 ACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCA 660
consensus_8500#1 ACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCA 296
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGT 720
consensus_8500#1 CCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGT 356
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 ACTGCAGCCCGCTCCGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCG 780
consensus_8500#1 ACTGCAGCCCGCTCTGGCTCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCG 416
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCG 840
consensus_8500#1 TCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCG 476
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGGTGAGA 900
consensus_8500#1 CGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGATGAGA 536
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCA 960
consensus_8500#1 TACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCA 596
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTT 1020
consensus_8500#1 AGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTT 656
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 GCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTG 1080
consensus_8500#1 GCGCAGATACTGGAGATGATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTG 716
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCG 1140
consensus_8500#1 TTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCG 776
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACA 1200
consensus_8500#1 CGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACA 836
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGT 1260
consensus_8500#1 AGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGT 896
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGAT 1320
consensus_8500#1 TTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGAT 956
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGA 1380
consensus_8500#1 TGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGA 1016
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCA 1440
consensus_8500#1 TGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCA 1076
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 GTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCC 1500
consensus_8500#1 GTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCC 1136
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGC 1560
consensus_8500#1 AGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGC 1196
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGT 1620
consensus_8500#1 AGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGT 1256
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 TCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGA 1680
consensus_8500#1 TCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGA 1316
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTT 1740
consensus_8500#1 AGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTT 1376
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 GTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTA 1800
consensus_8500#1 GTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTA 1436
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAA 1860
consensus_8500#1 CAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAA 1496
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 AGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGT 1920
consensus_8500#1 AGAACGACACTGAGCTTCTGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGT 1556
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 GGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGT 1980
consensus_8500#1 GGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGT 1616
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACAT 2040
consensus_8500#1 CAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACAT 1676
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCAT 2100
consensus_8500#1 CAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCAT 1736
consensus_8500#2 ------------------------------------------------------------
consensus_8500#0 CAGATGATAATGCAAAGAATGATTCAGAAGATGGTTGTGAAAGGTCAATATCACGTATAA 2160
consensus_8500#1 CAGATGATAATGCAAAGAATGATTCAGAAGATGGTTATGAAAGGTCAATATCACGTATAA 1796
consensus_8500#2 ----------------------------------------------------CCGTGTTC 8
*** *
consensus_8500#0 AACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTG 2220
consensus_8500#1 AACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTG 1856
consensus_8500#2 GGACGCGTGTTNCGGACGCGT------GTTCTAGTCAGGACCCTTCTTCCTTGAACTTTG 62
** * * * * * ******************************
consensus_8500#0 TGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTG 2280
consensus_8500#1 TGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTG 1916
consensus_8500#2 TGGCATGAATTACTTGTGGCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTG 122
************************************************************
consensus_8500#0 TGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTC 2340
consensus_8500#1 TGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTC 1976
consensus_8500#2 TGTAGCCAAGTCGTTGCAGCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTC 182
************************************************************
consensus_8500#0 TGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGA 2400
consensus_8500#1 TGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGA 2036
consensus_8500#2 TGGTGTAGGATGGTTGGTTATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGA 242
************************************************************
consensus_8500#0 CACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAA 2460
consensus_8500#1 CACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAA 2096
consensus_8500#2 CACTGAAGCCATCCAGAGGTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAA 302
************************************************************
consensus_8500#0 CTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTA 2520
consensus_8500#1 CTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTA 2156
consensus_8500#2 CTTCAGTTTTGTAGATTATTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTA 362
************************************************************
consensus_8500#0 AGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCT 2580
consensus_8500#1 AGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCT 2216
consensus_8500#2 AGTTATTAGTGTTTTCCTGATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCT 422
************************************************************
consensus_8500#0 GGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAA 2640
consensus_8500#1 GGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAA 2276
consensus_8500#2 GGGGGATATACGGTTTTTTTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAA 482
************************************************************
consensus_8500#0 GTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGC-------------- 2682
consensus_8500#1 GTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGGCAGCGGTATAACCTTCTG 2332
consensus_8500#2 GTAAACTTGTTTTGTTTCAGTTCTGTTTGAATCAATGG------------------ 520
**************************************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||