These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8577#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1420 fasta sequence [CCTTCCCCACCCCCCCCCATTTACTCGATCATCACAACGTGCCAATCAATTAATCGATCGATCAGTTTTGTGCGTACGTTAGCNTGTGGAGAGGGAGAGAAATGGACATGGAAATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCNATTGTTGC-AGCT-GC-AGCTTTCTGGGATTCCGAGGAGGCGATAAGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCAGCCTG-AGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCAGGCTGGGTTCTTGGACGGCGCCGCCGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGCCATGCCGCCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCACGTGGAGATGGCCGCCGCACCGCCGGAGCCGGCCGGCGTCGGCCTCGCCGACGTGCTCCGGGAGCACCACGGGGGCGGCAAGGCCGGCGGCGGCAAGGTGGTGTTCGGGTCGCAGCTCAGAATCCAGGTGCCCACGGGGAGGGCCGTCGAGCTGGTGTCCTCCCCGATCGAGTTCGGCGTCAAGAACCGGGACGCCCACTTGGCGGCGATGTCGCCGGCGAGGAGGTTCCTGCCGGAGGTGGTCAGCTCGCCGTCCGCGCGGGTGTTCG-CCG-CCGCCGTGGTGTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT-CCT-GAA-CT-CTTGCTA-CGCATGCAA-CAAGCAGCTTGGA-CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA-CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAAAAA] [+] EMBL C72329 [CCTTCCCCACCCCCCCCCATTTACTCGATCATCACAACGTGCCAATCAATTAATCGATCGATCAGTTTTGTGCGTACGTTAGCNTGTGGAGAGGGAGAGAAATGGACATGGAAATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCNATTGTTGCNAGCTAGCNAGCTTTCTGGGATTCCGAGGAGGCGATAAGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGNGTaa ] [+] EMBL AK066202 [ ATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCTATTGTTGC TGCT GC TGCTTTCTGGGATTCCGAGGAGGCGATATGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCAGCCTG AGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCAGGCTGGGTTCTTGGACGGCGCCGCCGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGCCATGCCGCCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCACGTGGAGATGGCCGCCGCACCGCCGGAGCCGGCCGGCGTCGGCCTCGCCGACGTGCTCCGGGAGCACCACGGGGGCGGCAAGGCCGGCGGCGGCAAGGTGGTGTTCGGGTCGCAGCTCAGAATCCAGGTGCCCACGGGGAGGGCCGTCGAGCTGGTGTCCTCCCCGATCGAGTTCGGCGTCAAGAACCGGGACGCCCACTTGGCGGCGATGTCGCCGGCGAGGAGGTTCCTGCCGGAGGTGGTCAGCTCGCCGTCCGCGCGGGTGTTCG CCG CCGCCGTGGTGTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT CCT GAA CT CTTGCTA CGCATGCAA CAAGCAGCTTGGA CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGAT ] [+] EMBL OSC225 [ GAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCA CTGTAGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCA GTAGGGTTCTTGGACGGCGCCG CGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGNCATGCCGNCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCAC ] [+] EMBL AU093962 [ GCGGGTGTTCGCCCGCCCGCCGTGGTNTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT CCT GAA CT CTT NTA CGCATGCAA CAAGCAGCTTGGA CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTATTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAA ] [+] EMBL AU101304 [ GTTCCCTGGAACCTCCTTGCTACCGCATGCAACCAAGCAGCTTGNACCATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTCCCGGTACCAGGAGATGCTTTTCGACGAGNCGNTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGACCAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||