These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8601#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 981 fasta sequence [AATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCTCCGCCCCGCCGCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGACGTGTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCGCGCGCGGAGCTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT-TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG-CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGTTCATTAGCTAACTAATAGATCATCTGATTGTAAAAAAAAAAAAAAAAA] [+] EMBL AK107563 [AATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCTCCGCCCCGCCGCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGACGTGTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCGCGCGCGGAGCTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGACGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAGGGCCCGTTCAATTTGACGTCATTTTCAACCATACCATTTTTTT TAAAGTTGTCAAAAAAATGTCTACGTTTAGTTTGCTACTAAATTTGATAAATATATAAGAAATCCTGCCA ] [+] EMBL C72022 [ CAAGACGCCGCACCCGGACGTTTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCNACCCGCGCTTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCNCGCNCGGAG TCGANATCGTGAAGGACACCGACATGTGGCAGTNCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGT ] [+] EMBL AU172439 [ CCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAaaa ] [-] EMBL CA761872 [ gaGCCAAGGGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGATCGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTCACTTCTCATCTCCATCTTTTGATCGATCGTGTCCAGGTA TTTGATTAGGTTAATTATGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGTTCATTAGCTAACTAATAGATCATCTGATTGTAAAAAAAAAAAAAAAAA] [+] EMBL CA766960 [ GTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGATCGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTCACTTCTCATCTCCATCTTTTGATCGATCGTGTCCAGGTA TTTGATTAGGTTAATTATGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGNTCATTAGCTAACTAATAGATCATCTGAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||