These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1418 fasta sequence [GCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAGTACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACCGACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAAGATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACATTATCCTTGCAATCAATATTTTGCTTTTGCCTGTACCAACCCCTGGTGGAGTTTTTGCTGGACTGGAAATTGATGTACAAGTACTGTGTGTAAAAAAAAAAAAAAAA] [+] EMBL AK073283 [GCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAGTACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACCGACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAAGATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACATTAT ] [+] EMBL CB640263 [ GGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGA ] [+] EMBL AK061587 [ CCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGGCAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACA ] [-] EMBL CA761218 [ GCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTAATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTACAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTTTGGTGTGAGACTGAAGCTGATCAGCAAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCACGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTGCTACCATCTTACATTATCCTTGCAATCAATATTTTGCTTTTGCCTGTACCAACCCCTGGTGGAGTTTTTGCTGGACTGGAAATTGATGTACAAGTACTGTGTGTAAAAAAAAAAAAAAAA] [+] EMBL AA750843 [ GCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCACGTTGGAGTGAGCTCTTGCTTTCAGCGGCTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||