These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8717#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 986 fasta sequence [TCCTCATCTAGGGTTTCCGCGTCGCCGCGGCCGCGAGTCGCCATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCAGATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAGCCGGGAGCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAAGGATAGGGAGAAGGAGAGGGACAAGGACAAGGAGAGGAGAAGCCGGGACCGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGAGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTGGCCAGCTGCTTCTTGGTCAACAGGTGATGGTTAAGCCATCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCAGCTTCACGTGGGGCAAGANAGTTGTATGTTGGAAATCTTCACTCAAATATTACTGAAGATCAATTGAGACAGGTCTTCGAACCGTTTGGTCAGGTGGAGCT] [+] EMBL CB648241 [TCCTCATCTAGGGTTTCCGCGTCGCCGCGGCCGCGAGTCGCCATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCAGATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAGCCGGGAGCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAAGGATAGGGAGAAGGAGAGGGACAAGGACAAGGAGAGGAGAAGCCGGGACCGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGAGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTGTCTGGCCAGCTGCTTCT ] [+] EMBL CB648023 [TCCTCATCTAGGGTTTCCGCGTCGCCGCGGCCGCGAGTCGCCATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCAGATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAGCCGGGAGCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAAGGATAGGGAGAAGGAGAGGGACAAGGACAAGGAGAGGAGAAGCCGGGACCGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGAGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTG ] [+] EMBL CB640469 [ CGAGTCGCCATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCATATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAACCGGGATCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAATGATAGGGA ] [+] EMBL CB638032 [ AGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTGGCCAGCTGCTTCTTGGTCAACAGGTGATGGTTAAGCCATCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCAGCTTCACGTGGGGCAAGANAGTTGTATGTTGGAAATCT ] [+] EMBL CK085109 [ CCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTGGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTGGCCAGCTGCTTCTTGGTCAACAGGTGATGGTTAAGCCATCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCAGCTTCAGGTGGGGCAAGAAAGTTGTATGTTGGAAATCTTCACTCAAATATTACTGAAGATCAATTGAGACAGGTCTTCGAACCGTTTGGTCAGGTGGAGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||