cluster # 8873

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Oryza sativa
cluster # 8873 cluster # 8873 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8873#0 length = 3156 sequences # 5

consensus_8873#1 length = 187 sequences # 1

consensusID : consensus_8873#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3156
fasta sequence

                              [TAATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGTTCAAGAATGGAGCAAGCTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTTTCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCTTGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCAGTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAACGGTCAGAGTTCCGTGATAATTATAAAAACAGCTGC]

[+] EMBL AK071881             [TAATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGTTCAAGAATGGAGCAAGCTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTTTCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCTTGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCAGTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGAGATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAAT                                                   ]
[+] EMBL AK100700             [  ATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGTTCAAGAATGGAGCAAGCTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTTTCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCTTGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCAGTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGAGAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCGCGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCCAGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCGGCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGCAGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCGCGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCGGGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACATGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCCAGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGCTGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGTCCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGAACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGCTCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACAGGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACGTGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCCGCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCGGCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCTGCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGGCCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCGTGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCGCCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCGCCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAGACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATATCACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGT                                                ]
[+] EMBL AK103914             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTTGGTTGAGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCGGCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGGTTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCAGACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTACTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGATTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCGGCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACAATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACAATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACCATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTCTTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAACTGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGGAGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGTTCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGGTGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTGGGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAACGGTCAGAGTTCCGTGATAATTATAAAAACAGCTGC]
[+] EMBL AU097013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAACAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGAACTGAT CTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAAaa                                  ]
[+] EMBL AK060551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGTGTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCTTTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGTGCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGT                                                ]




>consensus_8873#0
TAATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAG
CAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGTTCAAGAATGGAGCAAG
CTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTT
TCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCT
TGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCA
GTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGA
GAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCG
CGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCC
AGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCG
GCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGC
AGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCG
CGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCG
GGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACA
TGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCC
AGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGC
TGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGT
CCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGA
ACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGC
TCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACA
GGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACG
TGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCC
GCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCG
GCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCT
GCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGG
CCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCG
TGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCG
CCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCG
CCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAG
ACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATAT
CACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTG
AGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCG
GCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGG
TTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCA
GACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTA
CTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGA
TTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCG
GCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACA
ATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACA
ATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACC
ATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTC
TTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAAC
TGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGG
AGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGT
GCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGT
TCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGG
TGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTG
GGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAA
CAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGA
ACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGT
GTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCT
TTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGT
GCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAA
CGGTCAGAGTTCCGTGATAATTATAAAAACAGCTGC

consensusID : consensus_8873#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence

                              [TGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACNCCCTAAGCTAGTTCAAGANTGGAGCAAGCTGGNAAGNAATGTGATCTTTGATNATCACTNCCTNTNNCTGATGATGATTNGGTTACTTNCTGGTACTATCAACACACATCAAAGCCTNGNTTCCTCTGTNGCTT]

[+] EMBL OSS0963A             [TGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACNCCCTAAGCTAGTTCAAGANTGGAGCAAGCTGGNAAGNAATGTGATCTTTGATNATCACTNCCTNTNNCTGATGATGATTNGGTTACTTNCTGGTACTATCAACACACATCAAAGCCTNGNTTCCTCTGTNGCTT]




>consensus_8873#1
TGAGTTCGTCAGTCATCTGAGCAAGATTTTCTTTGCTATTCCAGTCGGTGACNCCCTAAG
CTAGTTCAAGANTGGAGCAAGCTGGNAAGNAATGTGATCTTTGATNATCACTNCCTNTNN
CTGATGATGATTNGGTTACTTNCTGGTACTATCAACACACATCAAAGCCTNGNTTCCTCT
GTNGCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8873#0      TAATAAGGTTCTCTTGTTGTTTATTATCCGTTCTGTTCTTGAGTTCGTCAGTCATCTGAG 60
consensus_8873#1      ---------------------------------------TGAGTTCGTCAGTCATCTGAG 21
                                                             *********************

consensus_8873#0      CAAGATTTTCTTTGCTATTCCAGTCGGTGACTGCCTAAGCTAGTTCAAGAATGGAGCAAG 120
consensus_8873#1      CAAGATTTTCTTTGCTATTCCAGTCGGTGACNCCCTAAGCTAGTTCAAGANTGGAGCAAG 81
                      *******************************  ***************** *********

consensus_8873#0      CTGGCAAGAAATGTGATCTTTGATGATCACTTCCTCTTCCTGATGATGATTTGGTTACTT 180
consensus_8873#1      CTGGNAAGNAATGTGATCTTTGATNATCACTNCCTNTNNCTGATGATGATTNGGTTACTT 141
                      **** *** *************** ****** *** *  ************ ********

consensus_8873#0      TCTGGTACTATCAACACACATCAAAGCCTTGATTCCTCTGTTGCTTGTACACACTGTCCT 240
consensus_8873#1      NCTGGTACTATCAACACACATCAAAGCCTNGNTTCCTCTGTNGCTT-------------- 187
                       **************************** * ********* ****              

consensus_8873#0      TGATCGTAGTAGAAGGAGAAGGTGAAGGAATCATCAGAGTACAGAGATTAATTTCTTGCA 300
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GTACAGATTGATTTGCTCTGCTTCTCTGCTGGTTCTTGCTGATCAAGAAGCATTTGATGA 360
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GAGCTTCTCCAATGGCGGGTGCAAGCCATCACCTGGTCGTCTTCTTGGCAGCGCTGCTCG 420
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CGTTGCTCCCGGGAAGCTCGCAGCTGCAGTACTCGCAGACATGGACGCTGTTCAAGATCC 480
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      AGCAGATGCTGAACCACCCGCCGGTGCTGAGCCACTGGCGCCGGACCACCGACTTCTGCG 540
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCGGCGGCGGCACGGCGGCGCCGTCGGCGGCCGTGGTGTGCTACGGCGACACGGTGACGC 600
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      AGCTGCACATCGCCGGCGTCCGCGGCGCGCCGCCGCTCCCGATGAACTTCTCCATCGGCG 660
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CGCTCGTCATGGCGCTGTCGAGGCTCCCCGACCTCAAGGTGCTCACGCTGTCCGGGCTCG 720
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GGCTCTGGGGCCCCCTGCCGGACAAGATCGGCCGCCTCGCCGCGCTGGAGATCGTCAACA 780
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGAGCGGCAACTACCTCTACGGCGGCGTCCCCGGCGGGCTGTCCCAGCTCACCGGCCTCC 840
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      AGACGCTGATCCTCGACGACAACCTGCTCGCCGGCGAGCTCCCGGCGTGGATCGGCGAGC 900
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGCCGCAGCTGGCCGTGCTGAGCCTGCGGAACAACTCGCTGGGCGGCGCCGTGCCGGCGT 960
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CCGTGGGTCGCATGGAGTCGCTGAGGTCGCTGGTGCTCGCGTCGAACAACCTGACGGGGA 1020
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ACCTGCCGGACATGAGCGGCCTCACCAACCTCCAGGTGATCGACGTCGGCGACAACTGGC 1080
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TCGGCCCGGCGTTCCCGGCGCTGGGGCGGAAGGTGGTCACGGTGGTGCTCAGCCGGAACA 1140
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GGTTCACCGGCGGCCTCCCCGGCGAGATCACCTCCTTCTACCTGCTCGAGCGGCTCGACG 1200
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGTCGTGGAACCGCTTCGTCGGCCCGTTCATGCCGGCGCTGCTGTCCCTGCCGGCCATCC 1260
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCTACCTCAACGTCGCCGGCAACAGGTTCACCGGCGTGCTCTCCGACAAGGTTGCCTGCG 1320
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCGACAATCTCCAGTTCGTCGACCTGTCCTCCAACCTCCTCACCGGCAGCGAGCCGGCCT 1380
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCCTGAGGCCGGACAAGAAGCCGGCGACGGTGGTGCTCGTCAATGCCAATTGCCTCGAGG 1440
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CCACCGGCGGCGACGCGTCGCAGCACCCGTCGCCGTTCTGCCAGAACCAAGCCTTGGCCG 1500
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGGGGATAACTCACGGCGGCAAGGTGAGGAAGAAGCTCACACATCACGCCGGCTTCCTCG 1560
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CCGGCATTGCAATGGCGGCTCTCGCCGCCGCGTCGGCCATCGCCGTCGTCGCCGTCGTCG 1620
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CCGTGAGGAGGAAGAACAAGAAAGGCGTAATGGTGAGGCCACCGGCGATGTTGGGAGAAG 1680
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ACAATTCTTCAAGCACGAGTGGCTACCCATCCAAGATGTTCGCCGATGCACGCTACATAT 1740
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CACAGACAGTGAAGCTGGGAGCTCTGGGAATTCCACCATACAGAACATTTTCTTTGGTTG 1800
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      AGCTTGAAGCTGCCACTGACAACTTTGAGAACTCTTTGCTACTGGGGCAAGATTCTTTCG 1860
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCGAGATGTACAGGGGGAGACTAGGCAATGGCACACTAGTGGCCATCAGGAGCCTGAAGG 1920
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TTAAGAGGAATCAGTCTTCCCTAAGCTTCAGTCGCCACATTGAAACAATTTCTAGGCTCA 1980
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GACACCGGAACTTGGTCAGCGCTCTCGGGCACTGCTTCGAGTATGATCTTGATGATTCTA 2040
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CTGTCACTCAGCTGTACCTCGTGTTCGAATACGTGCAAAACGGGAACCTACGGAGCAGGA 2100
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TTTCGCAAGGAACTGAAGGAAGGAAGCTTACATGGGCACAGAGAATATCAGCTGCCATCG 2160
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCATCGCCAACGGCATTCAGTTCTTGCATGCTGGGATGATGCCTGGCCTGTTTGGAAACA 2220
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ATCTGAAGATCAACAACATTCTTCTCGATCAGAATCATGTCGCGAAGATCAGCAGCTACA 2280
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ATATCCCAATCCTAGGAGAGGCCATGAAATCTGAGAAGGGAGGACCTGGAGGCAAGCACC 2340
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ATACTGAAAGCCCACTGCTCAACGATAAAACCGACATCTTCGATTTCGGGGTGATCCTTC 2400
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TTGAGATCGTGTCTGGAAAGCCAATCACATCCTTATATGAGGTTGAGATAATGAAAGAAC 2460
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGATGCTATGGGCAGTCGCCGACGAGGATTTGGTGAGGAGGAGGAGCTTTGCCGACCAGG 2520
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      AGGTGAGCAAGGGATGCTCTGACGAGTCGCTGAGGACGATCATGCAGATCTGCCTGAGGT 2580
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCCTGGCCAAGGAGGCTGTGCAGCGGCCGTCCATCGAGGACGTCCTCTGGAACCTGCAGT 2640
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TCGCTGCACAGGTGCAGGACGACTGGGAAGGAGATAACCGGAGCAGCGACGGTTCAATGG 2700
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TGTCGTCGTCGTCCCGGATCACGAAATCCTCCAGATTCCAGAATGAGCAAACCAGGTCTG 2760
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GGCGGGAAAAAGAATGTGAGGATTCGTCAGCTCGTGGATCAGTGTGGCTGCAGGCTGCAA 2820
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CAGAAGATGGAAATTTTGAGACAGGCAGGAGGCAAGCTGAAGATGAAAGATATTGATGGA 2880
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      ACTGATCCTCCGGGTTGTGCTTCTGTCTTGATGCACACAACCTTCCCCTTTCCTGATCGT 2940
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GTTTGCTCACTGAATCCTTTAAATCTCAGAAACGCCTTCATTTGTTTTTTCTTCTTTTCT 3000
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      TTCTTTTTTGTCTTTAGGCGTACAATAATATGTGCTTTTTAGGCGTACAAATAATGTTGT 3060
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      GCTGTGCAAGCCCCTGTATCGTTCTGTCAATATTAAAGCTGGAATAGTTTCTACTACCAA 3120
consensus_8873#1      ------------------------------------------------------------
                                                                                  

consensus_8873#0      CGGTCAGAGTTCCGTGATAATTATAAAAACAGCTGC 3156
consensus_8873#1      ------------------------------------