These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9162#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2398 fasta sequence [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA] [+] EMBL AK111077 [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACT ] [+] EMBL AK073550 [ AGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAACGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATCCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCT ] [+] EMBL C26718 [ ntngnGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTNTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGACCTTGNTAA ] [+] EMBL BP184680 [ ATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGA ] [+] EMBL CF324916 [ AACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCA ] [+] EMBL AU082869 [ GACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACNTGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATNGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCNATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATNTCTTAAGNCCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||