cluster # 9249

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Oryza sativa
cluster # 9249 cluster # 9249 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9249#0 length = 463 sequences # 6

consensusID : consensus_9249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 463
fasta sequence

                              [CTGAAGGGAGTAGAAAATTTTCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]

[+] EMBL CF338663             [CTGAAGGGAGTAGAAAATTTTCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]
[+] EMBL CF339634             [      GGAGTAGAAAATTTTCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]
[+] EMBL CF338397             [      GGAGTAGAAAATTTTCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]
[+] EMBL AK107946             [                       CGGCTCGCCCGATGTCGCTGGTCGCCTACGGCGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCTTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATGTTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]
[+] EMBL CF340156             [                        GGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]
[+] EMBL CF340454             [                        GGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT]




>consensus_9249#0
CTGAAGGGAGTAGAAAATTTTCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTC
GTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCCTCTCCCGCTCC
CGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGC
CGCTCCTCAGCCTCCGCCCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTC
CCTGCCCACACCGTCACTAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCT
GCCCTCTAGAGGATCTACTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGG
ATCTGCATTTCAAGACCCACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGG
TGCCAGGATCGCTGCTGGGAACACGTTAGTTCCACCACAGCTT

clustalw multiple alignements is not computed in this case