cluster # 9804

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Oryza sativa
cluster # 9804 cluster # 9804 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9804#0 length = 2758 sequences # 4

consensus_9804#1 length = 796 sequences # 1
consensus_9804#2 length = 135 sequences # 1

consensusID : consensus_9804#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2758
fasta sequence

                              [ATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTCCGCCTCCGCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTTCCCCCGCCGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAAGACGTTGGGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGTGCACGTCCACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCAAGCCACCGAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTCACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAATGAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTCATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTTATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATTTGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGATGTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTTGATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATTTCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAATATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGTTCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAAAAATTTCAAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAGCGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTCTGAGTTCGCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGCCACAAAAAAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGACTCTTCGATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGATGAATGAAGCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGAAATTCCCAAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATATAACCACATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTTTAGAGAATTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGACTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTCATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAATCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCAGGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGATCCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAGTGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAGCTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAGGAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATTTCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATCCATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTGTATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAACGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCACTGTACATATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTACTTATGTAAGATGCTTTGAT-TTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAACATAGTTA]

[+] EMBL AK102556             [ATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTCCGCCTCCGCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTTCCCCCGCCGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAAGACGTTGGGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGTGCACGTCCACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCAAGCCACCGAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTCACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAATGAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTCATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTTATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATTTGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGATGTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTTGATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATTTCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAATATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGTTCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAAAAATTTCAAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAGCGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTCTGAGTTCGCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGCCACAAAAAAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGACTCTTCGATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGATGAATGAAGCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGAAATTCCCAAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATATAACCACATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTTTAGAGAATTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGACTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTCATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAATCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCAGGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGATCCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAGTGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAGCTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAGGAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATTTCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATCCATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTGTATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAACGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCACTGTACATATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTACTTATGTAAGATGCTTTGAT TTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAACATAGTTA]
[+] EMBL CB663999             [                                                                                                                                                                                                                                                                                                GCTCAAGCCACCGAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTCACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAATGAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTCATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTTATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATTTGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGATGTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTTGATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATTTCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAATATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGTTCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCANGAAATCTTGGATAAAAATTTCAAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK061113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTCATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAATCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCAGGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGATCCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAGTGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAGCTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAGGAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATTTCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATCCATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTGTATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAACGAAATAATAATAGAGTAAATATTTCAAGTTTCA                                                                                                                                                                                                             ]
[-] EMBL CB648412             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACACCCAAATCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCAGGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGATCCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAGTGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAGCTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAGGAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATTTCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATCCATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTGTATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAACGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCACTGTACATATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTACTTATGTAAGATGCTTTGATGTTTTTTATCAGTTAAAGTTCAATCAAATTTAT              ]




>consensus_9804#0
ATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTCCGCCTCC
GCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTTCCCCCGC
CGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAAGACGTTG
GGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGTGCACGTC
CACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCAAGCCACC
GAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTC
ACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAAT
GAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTC
ATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTT
ATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATT
TGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGAT
GTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTT
GATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATT
TCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAAT
ATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGT
TCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAAAAATTTC
AAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAG
CGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTCTGAGTTC
GCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGCCACAAAA
AAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGACTCTTCG
ATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGATGAATGAA
GCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGAAATTCCC
AAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATATAACCAC
ATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTTTAGAGAA
TTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTG
CCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTAT
AAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATT
AGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGT
CTTGACTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGC
ATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTA
TTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAAC
ATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTC
ATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAA
TCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCA
GGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGAT
CCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAG
TGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAG
CTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAG
GAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATT
TCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATC
CATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTG
TATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAA
CGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCACTGTACAT
ATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGCCCGTTTG
GTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTACTTATGTA
AGATGCTTTGATTTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAACATAGTTA

consensusID : consensus_9804#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 796
fasta sequence

                              [AAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTACTCTCTGTTACCCTGTTTATCATGCTGGTTGATATATTAGTGATACATAGCTCAATGAAACTGCTAAAAGTTATTTTGCAGCTCCACATATCACTTGAAACTCTATGGGGCTTGTTGAATTATGTAGGATTTGTTTTTTTTCTTCTATTTATCTAGATAGATTACTTGTTGTGTCATTTGTCATAATAAAAACCAAAAATTATCTCTTTGCACTATGACCAAGCAGGAGATGATGTGGGCCAATCATTCCAAGTATATGCTTGCTTGTCTTGTTTATCACATAACTTATCGTGCTAAGTGTTTATAAAAACCTAGGAGCATATAGCAATAGCAGTTATTTAGCAGAAGGTAGTTATTTCACATTGTTTTTGGCAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAA]

[+] EMBL CB648411             [AAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTACTCTCTGTTACCCTGTTTATCATGCTGGTTGATATATTAGTGATACATAGCTCAATGAAACTGCTAAAAGTTATTTTGCAGCTCCACATATCACTTGAAACTCTATGGGGCTTGTTGAATTATGTAGGATTTGTTTTTTTTCTTCTATTTATCTAGATAGATTACTTGTTGTGTCATTTGTCATAATAAAAACCAAAAATTATCTCTTTGCACTATGACCAAGCAGGAGATGATGTGGGCCAATCATTCCAAGTATATGCTTGCTTGTCTTGTTTATCACATAACTTATCGTGCTAAGTGTTTATAAAAACCTAGGAGCATATAGCAATAGCAGTTATTTAGCAGAAGGTAGTTATTTCACATTGTTTTTGGCAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAA]




>consensus_9804#1
AAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTG
TTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTATAAGTTGCACTCGTGTATCA
TTCAGAGTTCGATGCAGTTCCAGCAAGAGGTACTCTCTGTTACCCTGTTTATCATGCTGG
TTGATATATTAGTGATACATAGCTCAATGAAACTGCTAAAAGTTATTTTGCAGCTCCACA
TATCACTTGAAACTCTATGGGGCTTGTTGAATTATGTAGGATTTGTTTTTTTTCTTCTAT
TTATCTAGATAGATTACTTGTTGTGTCATTTGTCATAATAAAAACCAAAAATTATCTCTT
TGCACTATGACCAAGCAGGAGATGATGTGGGCCAATCATTCCAAGTATATGCTTGCTTGT
CTTGTTTATCACATAACTTATCGTGCTAAGTGTTTATAAAAACCTAGGAGCATATAGCAA
TAGCAGTTATTTAGCAGAAGGTAGTTATTTCACATTGTTTTTGGCAGGTCCACCTCATTA
GCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTC
TTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCA
TTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTAT
TCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACA
TCCTTTTAGATGCCAA

consensusID : consensus_9804#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 135
fasta sequence

                              [CCGCGGACGCGTGGGTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAACTACCCCTCCGTTTCTTTACTTATGTAAGATGCTTTGATTTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAAAA]

[+] EMBL BM421901             [CCGCGGACGCGTGGGTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAACTACCCCTCCGTTTCTTTACTTATGTAAGATGCTTTGATTTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAAAA]




>consensus_9804#2
CCGCGGACGCGTGGGTGCCCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAACTAC
CCCTCCGTTTCTTTACTTATGTAAGATGCTTTGATTTTTTTATCAGTTAAAGTTCAATCA
AATTTATAGAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9804#0      ATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTCCGCCTCC 60
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTTCCCCCGC 120
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      CGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAAGACGTTG 180
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGTGCACGTC 240
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      CACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCAAGCCACC 300
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTC 360
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAAT 420
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTC 480
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTT 540
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATT 600
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      TGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGAT 660
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTT 720
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATT 780
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      TCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAAT 840
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGT 900
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      TCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAAAAATTTC 960
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      AAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAG 1020
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      CGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTCTGAGTTC 1080
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGCCACAAAA 1140
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      AAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGACTCTTCG 1200
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGATGAATGAA 1260
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      GCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGAAATTCCC 1320
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      AAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATATAACCAC 1380
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTTTAGAGAA 1440
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      TTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTG 1500
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      CCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTAT 1560
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      AAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATT 1620
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      AGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGT 1680
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      CTTGACTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGC 1740
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTA 1800
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      TTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAAC 1860
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTC 1920
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      ------------------------------------------------------------
                                                                                  

consensus_9804#0      ATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAA 1980
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      -----------------------------------AAGCTGCAACATGCAAGTTCTCAGA 25
                                                                                  

consensus_9804#0      TCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCA 2040
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      CAGCTTAAAAGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAG 85
                                                                                  

consensus_9804#0      GGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGAT 2100
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      AAGTGTAATGATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCA 145
                                                                                  

consensus_9804#0      CCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAG 2160
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      AGAGGTACTCTCTGTTACCCTGTTTATCATGCTGGTTGATATATTAGT---GATACATAG 202
                                                                                  

consensus_9804#0      TGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAG 2220
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      CTCAATGAAACTGCTAAAAGTTATTTTGCAGCTCCACATATCACTTGAAACTCTATGGGG 262
                                                                                  

consensus_9804#0      CTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAG 2280
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      CTTGTTGAATTATGTAGGATTTGTTTTTTTTCTTCTATTTATCTAGATAGATTACTTGTT 322
                                                                                  

consensus_9804#0      GAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATT 2340
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      GTGTCATTTGTCATAATAAAAACCAAAAATTATCTCTTTGCACTATGACCAAGCAGGAGA 382
                                                                                  

consensus_9804#0      TCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATC 2400
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      TG-ATGTGGGCCAATCATTCCAAGTATATGCTTGCTTGTCTTGTTTATCACATAACTTAT 441
                                                                                  

consensus_9804#0      CATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTGGATTTTG 2460
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      CGTGCTAAGTGTTTATAAAAACCTAGGAGCATATAGCAATAGCAGTTATTTAGCAGAAGG 501
                                                                                  

consensus_9804#0      TATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCATGATGTAA 2520
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      TAGTTATTTCACATT-GTTTTTGGCAGGTCCACCTCATTAGCAAGGTGAGGCACCCTCAC 560
                                                                                  

consensus_9804#0      CGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCACTGTACAT 2580
consensus_9804#2      ------------------------------------------------------------
consensus_9804#1      CTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGTCTTGTCTATGAATACGTGCCA 620
                                                                                  

consensus_9804#0      ATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGCC-CGTTT 2639
consensus_9804#2      --------------------------------CCGCGGACGCGTG---GGTGCC-CGTTT 24
consensus_9804#1      AACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGCATTCCTC-AGTTGCCATGGAA 679
                                                        *  *          * ****  *   

consensus_9804#0      GGTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTACTTATGT 2699
consensus_9804#2      GGTCTAAGTAGCAGTTGTCATGGGGTTGACAA-CTACCCC-TCCGTTTCTTTACTTATGT 82
consensus_9804#1      AATCCGTGCACGTATTGTTGCTGAAATCTCAA-GTGCTCTATTC-TTCTTGCATTCCTGT 737
                        **   * *    ****    *   *  ***  * * *  * * **  *  * *  ***

consensus_9804#0      AAGATGCTT-TGATTTTTTT--ATCAGTTAAAGTTCAATCAAAT--TTATAGAAAACATA 2754
consensus_9804#2      AAGATGCTT-TGATTTTTTT--ATCAGTTAAAGTTCAATCAAAT--TTATAGAAAAAA-- 135
consensus_9804#1      AAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAACATCCTTTTAGATGCCAA- 796
                      **    *   ***** *      * * ** *** *  *  * **  ** ****    *  

consensus_9804#0      GTTA 2758
consensus_9804#2      ----
consensus_9804#1      ----