These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9917#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 824 fasta sequence [GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG-G-AGGTGGACCGTCT-GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTAGGTAATCAGAAAGCAACATGTAGCTGTTT-TCAAAAAAAAGGCTTGTAAGGCT] [+] EMBL CB682686 [GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAAAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTA ] [+] EMBL CF340321 [ ctgaaggagGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGGNGAAGGTGGACCGTCTGGGGCCGNCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTG ] [+] EMBL CF340575 [ CTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGGCTCACCGCCCTCCGCC ] [+] EMBL CF339960 [ CTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCA ] [+] EMBL CF340364 [ tTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCANAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCA ] [-] EMBL CB682687 [ GGGCGCCTCGCTCACCTCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTTT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCTTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTAGGTAATCAGAAAGCAACATGTAGCTGTTT TCAAAAAAAAGG ] [+] EMBL CA764541 [ ATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGGTTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTGATATGTTTTCTACTTGTATTTAATCAGAAAGCAACATGTAGCTGTTTGTCACCACTCTTGCTTGTAAGGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||