These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1243 fasta sequence [CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGATCGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTTAGACCCATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC-GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATAGGAACCTACCCCTATACTACACGAAAGCTACACTTCTCTCTTTTTCTTTCAT-TTTTTTGTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAATTTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTGGCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATCAATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC] [+] EMBL SMT14514 [CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGATCGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTNAGGCCCATCANAGCTTCTAGCGGGATTTCTACATCTACTTCGGATCCCACGCTAGATGCACCTAANACCTCATTCTCACATACCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCAAGTCCAGACCTGCAGACCACACCGCCCTTGACTGTGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCtg ] [-] EMBL BG931840 [ tCGCATCGAAACAGTCAGCATTGATCGTCTCAAGCCAGCACACGTCGATGACAGTGCTATACCTGATAAGCCGAGACCCAATGTTAGACCCATCAGAGTTTCTAGCGGGATTTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCTGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGAa ] [+] EMBL AI018947 [ TGCTAGACCCATCAAAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCGGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAGCTACGGATACAGTATAGGNCCCTCCCCCTATACTA ] [+] EMBL AI976068 [ ACCTATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCTACAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATAGGAATCTACCCCTATACTACACGAAAGCTACACTTCTCTCTTTTTCTTTCAT TTTTTTGTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAATTTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTGGCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCT ] [+] EMBL BG930940 [ gTCCCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGAGCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGGAGACTTCCGTCTCACGTCCAGACCGGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGAGTAACCTCATAACCAGCTACGGATACAGTATAGGAACCTACCCCTATAC ] [-] EMBL BG931421 [ TCGCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCAGCAGACCACATCGCCCTCGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCGCGACTAACCTCATAACCAACTGCGGATACAGTATAGGAA ] [-] EMBL BG931222 [ CTCTACATCTACTTCGGATCCCACGCTAGATGCACCTGAGACCACATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCTGTCTACGGAC GAGACTTCCGTCTCACGTCCAGACCAGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCTGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTGTAGGAATCTACCCCTATAATACACGAAAGCTACACTTTTCTCTTTTTCTTTCATGTTTTTTGTTgat ] [+] EMBL BG932866 [ GATCTCTCTGACTCCAAATACGTATGATATACATTTGGTCCCGAACATGGTTATCCTGGTCGCATCTGGTTCCTTGGCTCAATCTGGTTTCGTCCTACATCTGCAGCGTTTCTGGTCCGGACCTCTACGAACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATCAATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAA ] [-] EMBL AI976827 [ TCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATTAATACAGTACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC] [-] EMBL BF936268 [ CGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTGTACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTG ] [-] EMBL AI018876 [ ACNCGATTGGAATANCGGAAACAATTATTATTATTGTANCCAAATGTNCCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCAGTTTCACTTCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGNTTTNTCACGCACTGCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCNATAAATATACTTG ] consensusID : consensus_11134#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1001 fasta sequence [ACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC-CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC-ATATACCGCCTGGTTTGG-TTCGAGCTTGC-T-CACGCACTGCTTGTTCGCTTG-TACTCTTTGGCACGTCTCGGTATTATTTCG-ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCATAGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACACGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAATATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTCTGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAGATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACAACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTCAAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGATGGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATATTCCTTGTAAAGTCTTTTTATGTCATATTATATAT] [-] EMBL AI018990 [ACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATNCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ] [+] EMBL BF440154 [ TTCTACGTCAAAGACTTTTGGTGGCAACTCGAGGATCAACGATCACT CCTGTTCTGCCAACGTTTTCGTCCTACAATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACGATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTATTCC ATATACCACCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTT ] [-] EMBL SMT14527 [ GGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCNAACGCCTTCGTCCTANAATGGCACGTTTCGCGATCAGTCCCACGAACGAAAGCGCTACGTATCGAAAGAGTAAACCCTTTCTAGCGGGGGGCNC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCC TTNCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ] [-] EMBL SMT14605 [ GTCCTANAATTGCACGTTTCGCGANCAGTCCCACGAATGAAACCGCTACGTAACGAAAGTGTAAATCCTTTCTAGCGGGGGGCNC CCNTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTANCCCGTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ] [-] EMBL SMT14513 [ GTTCCGCGATCAGNCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATCCTTTCTAGCGGGGGGCTC NTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAANTANTATTATTGTAACCAATTGTACCAGAGANTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACNTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTTN T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ] [-] EMBL AI018879 [ AAACCGCTACGTATCGAAAGTGTAAANCCTTTCTAGCGGGGGGCNC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGANTGTTTTACTGTATTTGTTTAACTGTATCCG TTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATACTTG ] [-] EMBL AI018909 [ AGTGTAAANCCTTTCTAGCGGGGGGCCCNCNGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTACNNCTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ] [-] EMBL AI018956 [ GTAAATCCTTTCTAGCGGGGGGCTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ] [+] EMBL BG930683 [ aTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTAT CCGCCTTGTTTGG TTCGAGCTTGC T CACGTACTGCTTATTCGCTTG TACTCTTTGACACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCATAGTCCGTCCACGACTCGACATCCA ] [+] EMBL BG931102 [ aTC CTGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACTTCTTGTTCCGCTAT CCGCCTTGTTTGG TTCGAGCTTGC T CACGTACTGCTTATTCGCTTG TACTCTTTGACACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTACGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACG ] [-] EMBL SM617 [ ACCAA TGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTATTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAAATATACTTG ] [-] EMBL AI018944 [ ACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTG T CACGCACTGCTTGTTCGCTTGTTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG ] [-] EMBL AI018954 [ CCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTGC T CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTNGTTCG ATACCACGAGATCGCTTTTAAATATACTTG ] [-] EMBL AI018913 [ CCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTATCCGTTTCACNNCTTGTTCC ATATACCNCCTGGTTTGGTTTCGAGCTTGC TCCACGCACTGCTTATTCGCTTG TACTC TTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCNCCNANAAATATACTTG ] [-] EMBL AI018900 [ AATTGTACCAGAGANTGTTTTACTGTANTTGTTTAACTGTATCCGTTTCACNTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTT N T CACGCACTGCTTGTTCGCTTG TACTNTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAANAAATATAC ] [-] EMBL AI019017 [ tCCAGAGGTTGTTTTACTGTATTTGTTTAACTGATTCCGTTTCACTTCTTGTTCC ATATACCGCCTGGTTTGG TTCGAGCTTNCGT CACGCACTGCTTGTTCGCTTG TACTCTTTGGCACGTCTCGGTATTATTTCG ATACCACGAGATCGCCAATAA ] [-] EMBL AI975516 [ AAGCCTTCTGGTTTACGGGCTATCAAGGGAACCAAGTCATATTTGTACGCGTAATCGAATAGTAGTGTTGATCATAGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACACGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAATATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTCTGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAGATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACAACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTCAAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGATGGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATATTCCTTGTAAAGTCTTTTTATGTCATATTATATAT] consensusID : consensus_11134#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence [TCTGATCTTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACAATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATTTTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAATTAACCCTGGCGAAAGCTGGCCTGATCACACACGCTCTAGTCAAAGCACTCAGTCGATGTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCTCAATCTAGTTCCGTCATACGTCTACAGTGTTTTGTGGTCCGGACCACTACGAACGCAATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAGAGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGACCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGCTGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC] [+] EMBL CD088116 [TCTGATCTTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACAATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATTTTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAATTAACCCTGGCGAAAGCTGGCCTGATCACACACGCTCTAGTCAAAGCACTCAGTCGATGTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCTCAATCTAGTTCCGTCATACGTCTACAGTGTTTTGTGGTCCGGACCACTACGAACGCAATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAGAGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGACCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGCTGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC] consensusID : consensus_11134#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 366 fasta sequence [TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATACGAATCTACCCCTATACTACACGAAAGCTACACTTTTCTCTTTTTCTTTCATTTTTTTGTTTACCCCGAGCCCCCGTTCATCACAATATCAT] [+] EMBL BG931308 [TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCACCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGACGAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTGACTGCGGATGAGATTGCAGGCTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTACGCTTTCTCGACTAACCTCATAACCAACTACGGATACAGTATACGAATCTACCCCTATACTACACGAAAGCTACACTTTTCTCTTTTTCTTTCATTTTTTTGTTTACCCCGAGCCCCCGTTCATCACAATATCAT] consensusID : consensus_11134#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 194 fasta sequence [TATTGTGATCGACGGGGGTTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCCACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGATACACTTTTCTCTTTTTCTCTCAATTTTTTTTGTTTACCCCGAC] [-] EMBL BG931462 [TATTGTGATCGACGGGGGTTCACGAGGTTCGAACGAGACTACCGTCTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCCACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGATACACTTTTCTCTTTTTCTCTCAATTTTTTTTGTTTACCCCGAC] [+] EMBL BG930912 [ gTCACGAGGTTCGAACGAGACTACCGTGTCACGTTCCGGTCGCCGAGTACGCTTACCCGTATGCTTTCGCGACTAACCTCATAACCAACTGCGGATACAGTATAGGACCCTAACCCTCTACTACACGAATGCTACACTTTTCTCTTTTGCTCTCAATTTTTTTAGTTTACCCCGA ] consensusID : consensus_11134#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 156 fasta sequence [TTCGGCACGAGATTTGTTTAACTGTATCCGTTTCACTTCTTATTCCATATACCACCTGGTATTGGTTCGAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACT] [+] EMBL AW146515 [TTCGGCACGAGATTTGTTTAACTGTATCCGTTTCACTTCTTATTCCATATACCACCTGGTATTGGTTCGAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACT] consensusID : consensus_11134#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 149 fasta sequence [ATTGGTTTAACTGGTATCAGTTCACTTCTTGGTTCCGCTATCCGCCTTGTTTNGGTTCGAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG] [-] EMBL AI018946 [ATTGGTTTAACTGGTATCAGTTCACTTCTTGGTTCCGCTATCCGCCTTGTTTNGGTTCGAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGAATACCACGAGATCGCCAATAAATATACTTG] consensusID : consensus_11134#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 137 fasta sequence [AGAGATTGTTTTACTGTATTTGTTTATACTGTATCAGTTTCACTTCTTGTTCCGTTATCCGCCTTGTTTGGTTCGAGCCTTGCTCACNTCTATCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACA] [-] EMBL AI018929 [AGAGATTGTTTTACTGTATTTGTTTATACTGTATCAGTTTCACTTCTTGTTCCGTTATCCGCCTTGTTTGGTTCGAGCCTTGCTCACNTCTATCGCTTGTACTCTTTGGCACGTCTCGGTATTATTTCGATACCACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 CGTNACGAAAAGACCTTCAAGGTTGANCGACGTGGCCGCATCGAAACAGTCAGCATTGAT 60 consensus_11134#1 ------------------------------------------------------------ consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 CGTNTCAAGCCAGCACACGTCGATGACAGTNCTATACCTGATAAGCCGAGACCCAATGTT 120 consensus_11134#1 -----------------------------------------ACCGTTCTACGTCAAAGAC 19 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 -----------------------------------------------------TCTGATC 7 consensus_11134#3 ---------------TCAAATATGGTATTGTGATACACGGGGGGTCCCATGCTAGATGCA 45 consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 AGACCCATCAGAGCTTCTAGCGGGATCTCTACATCTACTTCGGATCCCACGCTAGATGCA 180 consensus_11134#1 TTTTGGTGGCAACTCGAGGATCAACGATCACTCCCTGTTCTGCCAACGTTTTCGTCCTAC 79 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 TTAACCCAGTGGGGGTCGATTCGAATATAGGTGTTACTGGTTAATAGTTGTCAAACTACA 67 consensus_11134#3 CCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC 105 consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 CCTGAGACCTCATTCTCACGTCCCAGTCAACAGCACGTGTCATCTGCCCCGTCTACGGAC 240 consensus_11134#1 AATTGCACGTTTCGCGATCAGTCCCACGAATGAAACCGCTACGTATCGAAAGTGTAAATC 139 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ATACTGGGCGTATCTTGAGAACTACACGCATGACACACTCCTCTATTCTTTTCTTTGATT 127 consensus_11134#3 GAAACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTG-ACTGCGGATGAGAT 164 consensus_11134#4 --------------------------------------------T-ATTGTGATCGA--- 12 consensus_11134#0 GAGACTTCCGTCTCACGTCCAGACCTGCAGACCACACCGCCCTTG-ACTGCGGATGAGAT 299 consensus_11134#1 CTTTCTAGCGGGGGGCTCCTGTAGTGACCGGCCAGTCTCGATAAG-AACACGATTGGAAT 198 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 TTTTTCTGTATCTTGATCCCACGCCTCCGACCATCGCCACGTTGGTACCGTCGACTTCAA 187 consensus_11134#3 TGCAGGCTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 222 consensus_11134#4 CGGGGGTTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 70 consensus_11134#0 TGCAGGCTCACGAGGTTCGAACGAGACTACCGT--CTCACGTTCCGGTCGCCGAGTACGC 357 consensus_11134#1 AATAGAAACAATTATTATTATTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGT 258 consensus_11134#5 -------------------------------------------TTCGGCACGAGATTTGT 17 consensus_11134#6 ------------------------------------------------------ATTGGT 6 consensus_11134#7 -------------------------------------AGAGATTGTTTTACTGTATTTGT 23 consensus_11134#2 TTAACCCTGGCGAAAGCTGGCCTGATCACACAC--GCTCTAGTCAAAGCACTCAGTCGAT 245 * consensus_11134#3 TTA-CCCGTACGC-TTTCTCGACTAA-CCTCATAAC----CAACTACGGATACAGTATAC 275 consensus_11134#4 TTA-CCCGTATGC-TTTCGCGACTAA-CCTCATAAC----CCACTGCGGATACAGTATAG 123 consensus_11134#0 TTA-CCCGTACGC-TTTCTCGACTAA-CCTCATAAC----CAACTACGGATACAGTATAG 410 consensus_11134#1 TTA-ACTGTATCCGTTTCACTTCTTG-TTCCATATA----CCGC--CTGGT-TTG-GTTC 308 consensus_11134#5 TTA-ACTGTATCCGTTTCACTTCTTA-TTCCATATA----CCAC--CTGGTATTG-GTTC 68 consensus_11134#6 TTA-ACTGGTATCAGTTCACTTCTTGGTTCCGCTAT----CCGC--CTTGTTTNG-GTTC 58 consensus_11134#7 TTATACTGTATCAGTTTCACTTCTTG-TTCCGTTAT----CCGC--CTTGT-TTG-GTTC 74 consensus_11134#2 GTTTCTGGCATGCGTTCGGACCCGAACTTGGATATTGTTGTCGCGCCTGGTTTCTTGGCT 305 * * * * * * * consensus_11134#3 GAATCTACCCCTATACTACACGAAAGCT-ACACTTTTCTCTTTTTCTTTCA--TTTTTTT 332 consensus_11134#4 GACCCTAACCCTCTACTACACGAATGAT-ACACTTTTCTCTTTTTCTCTCAATTTTTTTT 182 consensus_11134#0 GAACCTACCCCTATACTACACGAAAGCT-ACACTTCTCTCTTTTTCTTTCA--TTTTTTT 467 consensus_11134#1 GAGCTTGCTCACGCACTGCTTGTTCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 367 consensus_11134#5 GAGCTTGCTCACGCACTGCTTGTACGCTTGTGCACCATGGCACGTCTCGGTA-TTATTTC 127 consensus_11134#6 GAAGCTNNTCACGCACTTCTTATTCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 117 consensus_11134#7 GAGC---CTTGCTCACNTCT--ATCGCTTGTACTCTTTGGCACGTCTCGGTA-TTATTTC 128 consensus_11134#2 CAATCTAGTTCCGTCATACGTCTACA---GTGTTTTGTGGTCCGGACCACTACGAACGCA 362 * * consensus_11134#3 GTTTACCCCGAGCCCCCGTTCATCACAATATCAT-------------------------- 366 consensus_11134#4 GTTTACCCCGAC------------------------------------------------ 194 consensus_11134#0 GTTTACCCCGAGCCTACGCCTTCGACCATCGCTGTTCTGGTATCGTCGACTTCAGTAAAT 527 consensus_11134#1 GA-TACCACGAGATCGCCAATAAATATACTTGATCTGGACTAGTAAAGCCTTCTGATTTA 426 consensus_11134#5 GA-TACCACGAGATCGCCAATAAATATACT------------------------------ 156 consensus_11134#6 GAATACCACGAGATCGCCAATAAATATACTTG---------------------------- 149 consensus_11134#7 GA-TACCACA-------------------------------------------------- 137 consensus_11134#2 ATCCAGTGCTATGCCTCCACCAATGATGGCAATGAAGACGATAAAGATCAGTTCTACGAG 422 * * consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TTTGGCGAAAGCTGGCCTGATCACCCACGCTCTAGTCAACGCACTCAGTCGACCTCTCTG 587 consensus_11134#1 CGGGCTATCAAGGGAACCAAGTCGTTTTTGGACACGTAATCGAATAGTAGTGGTGATCAT 486 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 AGGCTGCAGTCGATCGCAGAGAAGTGCCTAAGAAAAGGATCTAACCATCCTGATAGGTGA 482 consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 GCTCCAAATACGTATGGTATACATTTGGTCCCGAACATGGNTATTCTGGTCGCATCTGGT 647 consensus_11134#1 AGTCCGTCCACGACTCGACATCCACTAGAGTCTACATACGCTGAGCTGATTTTTCGAACA 546 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 CCTAAGCACCAGAGTCGTGATGGACAACACTGGGTACAAAAATCATGGGACGATATGGGC 542 consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TCCTTGGCTCAATCTGGGTTCGTCCTACATCTGCGGCGTTTCTGGTCCGGACCTCTACGA 707 consensus_11134#1 CGTTTCAACCTCTGGACAACCTCCCAGAGAACATTACTACGACAGGACTCAGTTTGCAAA 606 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 TGGGTGAAATGAATGAGAATGGTGAGGGATTCGCAAATTTACGTGC-------------- 588 consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 ACGCAACTTTCAGATTCTGGATACAAACCACTCTGGTGTAGCATGCTAATCCAAGCAATC 767 consensus_11134#1 TATATGTATCGAAGATGATACAGATAGCTTATTCATGATTGAAAACTGATTGGAAAACTC 666 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 AATACGGCACGTTCCTTCTGGTACCGTTCTACGTCAAAGACTTTTGGTGGCAACTCGAGG 827 consensus_11134#1 TGTTCTGTATGTTGTCAAGTTCTACTAAACATCAGGGAGAAAATTGGAAGGCATATTCAG 726 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 ATCAACGATCACTTCCTGTTCTGCCAACGCCTTCGTCCTACAATTGCACGTTTCGCGATC 887 consensus_11134#1 ATTTTCGTTTTATTTCTACATCCAATTATACACCATAATATCGAGTTACTGAGTTTAACA 786 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 AGTCCCACGAACGAAACCGCTACGTATCGAAAGTGTAAACCCTTTCTAGCGGGGGGCTCC 947 consensus_11134#1 ACCTCACTGTGTTGCTGTAATGCGACAATCAGGACTATTGCATCACATTACTAACCTGTC 846 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TGTAGTGACCGGCCAGTCTCGATAAGAACACGATTGGAATAACAGAAACAATTATTATTA 1007 consensus_11134#1 AAAAGGTTCCCTACCTTCTCGTATTTTACAGATTTTTTCCGCATCACACCCAAGGTGGAT 906 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TTGTAACCAATTGTACCAGAGATTGTTTTACTGTATTTGTTTAACTGTGTCAGTTTCACT 1067 consensus_11134#1 GGGTTTTGTGCCAATGATGAACCCCTTAAAGTGTGAACTGAATGGTCTGTTTTTAAAATA 966 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TCTTGTTCCGCTATCCGCCTTGTTTGGTTCGAGCTTGCTCACGTACTGCTTATTCGCTTG 1127 consensus_11134#1 TTCCTTGTAAAGTCTTTTTATGTCATATTATATAT------------------------- 1001 consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 ------------------------------------------------------------ consensus_11134#4 ------------------------------------------------------------ consensus_11134#0 TACTCTTTGACACGTCTCGGTATTATTTCGATACCACGAGATCGCCAATAAATATACTTG 1187 consensus_11134#1 ------------------------------------------------------------ consensus_11134#5 ------------------------------------------------------------ consensus_11134#6 ------------------------------------------------------------ consensus_11134#7 ------------------------------------------------------------ consensus_11134#2 ------------------------------------------------------------ consensus_11134#3 -------------------------------------------------------- consensus_11134#4 -------------------------------------------------------- consensus_11134#0 ATCTGGACTAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACC 1243 consensus_11134#1 -------------------------------------------------------- consensus_11134#5 -------------------------------------------------------- consensus_11134#6 -------------------------------------------------------- consensus_11134#7 -------------------------------------------------------- consensus_11134#2 -------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||