Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 2936 cluster # 2936       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2936#0 length = 437 sequences # 2  
consensusID : consensus_2936#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 437
fasta sequence 
                              [GCGGCCACTTCACACCTGTCGGGAAGTCGTATAGTGGCTCTTCGCAGGTCGTAGTCCTTTCATCATAGTTACTCGTAACCTATTAGCTTCCGGGAAACAGTTTAAGTTGTTTTAACAGGGTCCTCAACAATTTTCGGATTCATAGTCGAGGTGTTGTGTTATTTCTTGTTTTTTCAAAATATGGAATTTTTATAAGGATTTAATCCGTAGTAGCCAGAAAATGTCTGGGTTACCGAACCTCACACCAACAAGAGTGGAGAAGGTCGCACCTCAAATAACAGAAGTTTCTGAAGCTCAGAACATAACAGTTGTGTCACGTTTATCTCCTCGTAAAGGAATTCAGTACACCCACCCAACTCATAACTTTATTGCTAACCCTTCTCGAGATTCGTTGTTTCAACTGGCTCTGTTGTTGTGATTCGGCCAATTGGCAATGC]

[+] EMBL CD098116             [GCGGCCACTTCACACCTGTCGGGAAGTCGTATAGTGGCTCTTCGCAGGTCGTAGTCCTTTCATCATAGTTACTCGTAACCTATTAGCTTCCGGGAAACAGTTTAAGTTGTTTTAACAGGGTCCTCAACAATTTTCGGATTCATAGTCGAGGTGTTGTGTTATTTCTTGTTTTTTCAAAATATGGAATTTTTATAAGGATTTAATCCGTAGTAGCCAGAAAATGTCTGGGTTACCGAACCTCACACCAACAAGAGTGGAGAAGGTCGCACCTCAAATAACAGAAGTTTCTGAAGCTCAGAACATAACAGTTGTGTCACGTTTATCTCCTCGTAAAGGAATTCAGTACACCCACCCAACTCATAACTTTATTGCTAACCCTTCTCGAGATTCGTTGTTTCAACTGGCTCTGTTGTTGTGATTCGGCCAATTGGCAATGC]
[-] EMBL CD200674             [GCGGCCACTTCACACCTGTCGGGAAGTCGTATAGTGGCTCTTCGCAGGTCGTAGTCCTTTCATCATAGTTATTCGTAACCTATTAGCTTCCGGGAAACAGTTTAAGTTGTTTTAACAGGGTCCTCAACAATTTTCGGATTCATAGTCGAGGTGTTGTGTTATTTCTTGTTTTTTCAAAATATGGAATTTTTATAAGGATTTAATCCGTAGTAGCCAGAAAATGTCTGGGTTACCGAACCTCACACCAACAAGAGTGGAGAAGGTCGCACCTCAAATAACAGAAGTTTCTGAAGCTCAGAACATAACAGTTGTGTCACGTTTATCTCCTCGTAAAGGAA                                                                                                   ]




>consensus_2936#0
GCGGCCACTTCACACCTGTCGGGAAGTCGTATAGTGGCTCTTCGCAGGTCGTAGTCCTTT
CATCATAGTTACTCGTAACCTATTAGCTTCCGGGAAACAGTTTAAGTTGTTTTAACAGGG
TCCTCAACAATTTTCGGATTCATAGTCGAGGTGTTGTGTTATTTCTTGTTTTTTCAAAAT
ATGGAATTTTTATAAGGATTTAATCCGTAGTAGCCAGAAAATGTCTGGGTTACCGAACCT
CACACCAACAAGAGTGGAGAAGGTCGCACCTCAAATAACAGAAGTTTCTGAAGCTCAGAA
CATAACAGTTGTGTCACGTTTATCTCCTCGTAAAGGAATTCAGTACACCCACCCAACTCA
TAACTTTATTGCTAACCCTTCTCGAGATTCGTTGTTTCAACTGGCTCTGTTGTTGTGATT
CGGCCAATTGGCAATGC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)