Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7344 cluster # 7344       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7344#0 length = 820 sequences # 5  
consensusID : consensus_7344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 820
fasta sequence 
                              [CTGTGAAACGATTGGCTTTTTTCATATTGAATGGAACACCGGGGGAGCTGTCGTAGTGGAAATGATGATCAGTGCAAAGATTTCAGCATGATGTACAATAATTACGATACAATTATTTCGACTCTAATGAGTCTGACACATTAGAATTTGACTCTTAACGTGGTTCATGTAAAGTTGAATCTTCGTTAGATGAACCTGCCTCAGCTGACGATGGGAGATCTGTATTAAAGTTCAAACATGTAAGTTTTGTGAGGCCTGTCAAAACACATGGTCTGTTTTCATCAAAACCATCGTCATCATCGTAGTTTTGGTAGGTCAAGGATTCATTGGACTGATAATTAAAACCACCTGAAGATATCAGTTCTGCCTCTATCGCAAGACGACGTTCACGTTCTTCTGAAAGCATTTGACGAACTCGACTGAGCTGGGATGCCAACATGTCCACAAGTTTTCGAAGTTCTTCGATACAGGTGACTAATTCTTCACGTGTTTGAAATTCAGTTTTAGGAAGTTTAACAGCAGCTCCTTGTTCCTTCTTATTGGACGTTTGATTTGAAGATAAAGGTAAGTATGACGGAGGGTCAGCTATTTTTTTGTCATAAGGTGAATGATCATCAGGGATTGTCTTCAAAGAAATGTTCTGGTCACCAGATATTATTTCTGTCTTCTTCGATACCACCTCACTTAAGCTTAGTTTCAGTGATGATAGCTGCAAATCAATAATTACATAATCATGGTCTCCTTCTTCAACCTCTTCTCGGGTTAGCTCCATGAAGGCGCACTAAGATCGCTGTGCATCTCAACAAGCAGCTCCATATGC]

[+] EMBL CD168356             [CTGTGAAACGATTGGCTTTTTTCATATTGAATGGAACACCGGGGGAGCTGTCGTAGTGGAAATGATGATCAGTGCAAAGATTTCAGCATGATGTACAATAATTACGATACAATTATTTCGACTCTAATGAGTCTGACACATTAGAATTTGACTCTTAACGTGGTTCATGTAAAGTTGAATCTTCGTTAGATGAACCTGCCTCAGCTGACGATGGGAGATCTGTATTAAAGTTCAAACATGTAAGTTTTGTGAGGCCTGTCAAAACACATGGTCTGTTTTCATCAAAACCATCGTCATCATCGTAGTTTTGGTAGGTCAAGGATTCATTGGACTGATAATTAAAACCACCTGAAGATATCAGTTCTGCCTCTATCGCAAGACGACGTTCACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD158079             [                                   ACACCGGGGGAGCTGTCGTAGTGGAAATGATGATCAGTGCAAAGATTTCAGCATGATGTACAATAATTACGATACAATTATTTCGACTCTAATGAGTCTGACACATTAGAATTTGACTCTTAACGTGGTTCATGTAAAGTTGAATCTTCGTTAAATGAATCTGCCTCAGCTGACGATGGGAGATCTGTATTAGAGTTCTAACATGTAAGTTTTGTGAGGCCTGTCAAAACACATGGTCTGTTTTCATCAGAACCATCGTCATCATCGTAGTTTTGGTAGGTCTAGGATTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD128063             [                                                                                                                                                                                                                                                                                                                                     ATTGGACTGATAATTAAAACCACCTGAAGATATCAGTTCTGCCTCTATCGCAAGACGACGTTCACGTTCTTCTGAAAGCATTTGACGAACTCGACTGAGCTGGGATGCCAACATGTCCACAAGTTTTCGAAGTTCTTCGATACAGGTGACTAATTCTTCACGTGTTTGAAATTCAGTTTTAGGAAGTTTAACAGCAGCTCCTTGTTCCTTCTTATTGGACGTTTGATTTGAAGATAAAGGTAAGTATGACGGAGGGTCAGCTATTTTTTTGTCATAAGGTGAATGATCATCAGGGATTGTCTTCAAAGAAATGTTCTGGTCACCAGATAT                                                                                                                                                                     ]
[-] EMBL CD168386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAATTCTTCACGTGTTTGAAATTCAGTTTTAGGAAGTTTAACAGCAGCTCCTTGTTCCTTCTTATTGGACGTTTGATTTGAAGATAAAGGTAAGTATGACGGAGGGTCAGCTATTTTTTTGTCATAAGGTGAATGATCATCAGGGATTGTCTTCAAAGAAATGTTCTGGTCACCAGATATTATTTCTGTCTTCTTCGATACCACCTCACTTAAGCTTAGTTTCAGTGATGATAGCTGCAAATCAATAATTACATAATCATGGTCTCCTTCTTCAACCTCTTCTCGGGTTAGCTCCATGAAGGCGCACTAAGATCGCTGTGCATCTCAACAAGCAGCTCCATATGC]
[-] EMBL CD168385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATACCACCTCACTTAAGCTTAGTTTCAGTGATGATAACTGCAAATCAATAATTACATAATCATGGTCTCCTTCTTCAACCTCTTCTCGGGTTAGCTCCATGAAGGCGCACTAAGATTGCTGTGAATCTCAGCAAGCAGC         ]




>consensus_7344#0
CTGTGAAACGATTGGCTTTTTTCATATTGAATGGAACACCGGGGGAGCTGTCGTAGTGGA
AATGATGATCAGTGCAAAGATTTCAGCATGATGTACAATAATTACGATACAATTATTTCG
ACTCTAATGAGTCTGACACATTAGAATTTGACTCTTAACGTGGTTCATGTAAAGTTGAAT
CTTCGTTAGATGAACCTGCCTCAGCTGACGATGGGAGATCTGTATTAAAGTTCAAACATG
TAAGTTTTGTGAGGCCTGTCAAAACACATGGTCTGTTTTCATCAAAACCATCGTCATCAT
CGTAGTTTTGGTAGGTCAAGGATTCATTGGACTGATAATTAAAACCACCTGAAGATATCA
GTTCTGCCTCTATCGCAAGACGACGTTCACGTTCTTCTGAAAGCATTTGACGAACTCGAC
TGAGCTGGGATGCCAACATGTCCACAAGTTTTCGAAGTTCTTCGATACAGGTGACTAATT
CTTCACGTGTTTGAAATTCAGTTTTAGGAAGTTTAACAGCAGCTCCTTGTTCCTTCTTAT
TGGACGTTTGATTTGAAGATAAAGGTAAGTATGACGGAGGGTCAGCTATTTTTTTGTCAT
AAGGTGAATGATCATCAGGGATTGTCTTCAAAGAAATGTTCTGGTCACCAGATATTATTT
CTGTCTTCTTCGATACCACCTCACTTAAGCTTAGTTTCAGTGATGATAGCTGCAAATCAA
TAATTACATAATCATGGTCTCCTTCTTCAACCTCTTCTCGGGTTAGCTCCATGAAGGCGC
ACTAAGATCGCTGTGCATCTCAACAAGCAGCTCCATATGC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)