These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8120#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 525 fasta sequence [TTAAGAA-AGAAAACAACTGTACAAAACAAATTCGCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCATTAAACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTTGTGCT-TAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGAGAAAAGAACGTGAGTGTAAATGACCGACTGCAGTATGGAGA] [+] EMBL CD143336 [TTAAGAA AGAAAACAACTGTACAAAACAAATTCGCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCATTAAACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTTGTGCT TAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGGGAAAAGAACGTGAGTGTAAATGACCGACTGCAGTATGGAG ] [+] EMBL CD143332 [TTAAGAATACAAAACAACTGTACAAAACAAATTCTCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCGTTACACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTTGTGCT TAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAGAATATATACAATAAAAATAAGTCTAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGAT ] [+] EMBL CD143335 [ TAAGAA AGAAAACAACTGTACAAAACAAATTCGCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCATTAAACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTTGTGCT TAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAGCATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGAGAAAAGAACGTGAGTGTAAATGACCGACTGCAGTATGGAG ] [+] EMBL CD143379 [ TAAGAA AGAAAACAACTGTACAAAACAAATTCGCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCATTAAACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTCGTGCT TAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGAGAAAAGAACGTGAGTGTAAATGACCGACTGCAGTATGGAG ] [+] EMBL CD143420 [ TAAGAA AGAAAACAACTGTACAAAACAAATTCGCAACATGGTAAATGTACAAACACACATGATAAAAGTAGGAAGAAATCTAGTTCGTATGATCGTAGACGCATTAAACACAGTTCAGTAGAAAAATGACTTTAACATTTATAACCATGATGGTAATCAAAATATGCAAATTTATAAAGGTGTGAATAAAGAATTACCAAATCACATTGTTTGAATTGGGAAGTTGAAAACAGGTAAAATATTTCACTAAATGATTTGTGCT TAGTTCAACGACCGGTCCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGGGATAAG ACGTGAGTGTAAATGACCGACTGCAGTATGGAG ] [-] EMBL CD070130 [ AGTGAAAAACAGGTAAAATATTTCACTAAATGA TTGTGCTNTAGTTCAACGACCGGACCATCACTATGACAACCATTACCAAGAGACATGAGCGAAGCTATAGAACGTTCACCAAAGAACGATTCAAACAAAATAAATACAATAAAAATAAGTAGAAAGATTAAGAAACATCTTCCGAATGACCGTTTATCGATACTGATTATAAAATGTGGTAAACTACTAGAATAAGTTTGTGAGAAAAGTGTGTGATACAGTGAACAGAGAAAAGAACGTGAGTGTAAATGACCGACTGCAGTATGGAGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||