These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8408#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 890 fasta sequence [GTGAAATTTACAGAAACAAGTTGTCTATATGCTTGCTTTTCTATACTACTTTATGTTAGTTATGATATATTGTGGAAAAACAAACAATAATGACGATAGTGTACTATTAATTTAGCCAAGTCATATCGCATCCCACTACATTCATTCCTAAAGCAGTTCCAGACTTCTCTGTATGTCAGGTTTTTAAACCTTCCTTTACAATGTTGCGTCGTGTAAAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA--AACTG-A-TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAGCATGATTCAGGTAGAAGTTCAACCAGAGAATCAGCAGATGTTTCTGTAGCATCCGAAAGGCCCAAAAAA] [+] EMBL CD094425 [GTGAAATTTACAGAAACAAGTTGTCTATATGCTTGCTTTTCTATACTACTTTATGTTAGTTATGATATATTGTGGAAAAACAAACAATAATGACGATAGTGTACTATTAATTTAGCCAAGTCATATCGCATCCCACTACATTCATTCCTAAAGCAGTTCCAGACTTCTCTGTATGTCAGGTTTTTAAACCTTCCTTTACAATGTTGCGTCGTGTAAAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGGAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAG AAACGTCGAANAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCANATGAGTCACAGACTAATATTTCACAGAGACCAGATGA AACTGNA TG TAGTCCATC ] [-] EMBL CD184896 [ AAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCCTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGGGACAAGATGA AACTG A TGTTAGTCCATCAGAAGGATCCCT ACACCAACCGCTGATGAAA ] [+] EMBL CD068309 [ TTATCATGTCTGTTCCCTCGGTCAGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCCTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA AACTG A TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGAT ] [-] EMBL CD070569 [ AATGGCAAAACAGTCCGCTACATTAACAGCTGGCTCCACATGATCTTCTGGACATGAGACAAGATCAGAAAGCAAACCTNTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTNTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTTCCGCTTATTCTTCAGGTTTAATGTCACCTGACGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA AACTG A TGTTAGTCCATCAGAA ] [+] EMBL CD119870 [ TCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA AACTG A TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAG ] [+] EMBL CD068305 [ AGACCAGATGACCAACTG ACTGTTAGTCCATCAGAAGGATCCCTAACA CAACCGCTGATGAAAGCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGTGATGAGACAAATAAAAGTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAGCATGATTCAGGTAGAAGTTCAACCAGAGAATCAGCAGATGTTTCTGTAGCATCCGAAAGGCCCAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||