These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8511#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1677 fasta sequence [CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC] [-] EMBL CD116276 [CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAA ] [-] EMBL CD192430 [ GTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGT ] [+] EMBL CD192131 [ ACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTG ] [+] EMBL CD090000 [ GAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCT ] [-] EMBL CD184815 [ GTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAAC ] [+] EMBL CD146940 [ TTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACGTGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAG ] [+] EMBL CD170749 [ TCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||