These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 929 fasta sequence [TTTTTTTTTTTTTCACAATAACAAATGTATTGATGTATACAAATTAAGAAAAAACATTACAACCTGTGGACCAATACAACGTTACAGGCTTAGATAAGCAAAATAAATAAGAAATATAATTAGGTAGGTCTTTAGTAAAAACATCAACACAATCCAAATTTACAACTGTTAAAGGTTCACACAAATTAGATAAGATACTATTGATTTCTGTCAAAGGACAAGTACACTCATGAACAGCTATCAAAGAAGTAACACTCAACCTCTTTTGAATTGTTTTGATGACATCTAAAAGGTTATTTTTTCCATCGATTAAGTCATTATTTGTCATGAGTAACACAACAGCATTACCTGCGAATAAAATAAAAAATACAAGTTTCAAAACGAAAGTACAATTTTTAGGTTCGGATAGTAGCTTACAATCTATTACGAGCACGATTGGTCCAGTTGGTTTTATGCAAAGATGAGCGACTGGAATAAGGAGTGTATCTTGTCTTTTTCCAGTAAGGAAAAGTTTCCCTGGACCTCCCAAAAACTTGCTATTGTAACGCATGAAGTATTTGAAGGCATCTTCTTTAATTGGAAAACCAGCTAAGGTTTCATTTTCAAGCACCTCACTTTGGATTAATTCATAACCCTTGGTCATTGAACTAGCTTGGGCAGCACGAGCAGTAGAGATGACTGTACTTAATGTCTTATATAGTGTTCCACTGTTGTTCGTTTTTGATACCTCAGTTGGAAAACATGATGATCCATTTAGTTCGAAAAGCCTTGTGTACATTGTCGCAGCCAGTTGGCGACTAGAAGCATTTACAAAAACGTTGTCCACACCTGACAGCAATAACATCTGGAAAAGTTGCCATACGATATTTGAATCTGTTTGCCATATATTGATCGCGAATTCATAGCTCAACGGACTAACTTCATTAGAT] [+] EMBL AA756914 [TTTTTTTTTTTTTCACAATAACAAATGTATTGATGTATACAAATTAAGAAAAAACATTACAACCTGTGGACCAATACAACGTTACAGGCTTAGATAAGCAAAATAAATAAGAAATATAATTAGGTAGGTCTTTAGTAAAAACATCAACACAAT CAAATTTACAACTGTTAAAGGTTCACACAAATTAGATAAGATACTATTGATTTCTGTCAAAGGCCAAGTACACTCATGAACAGCTATCAAAGAAGTAACACTCAACCTCTTTTGANTTGTTTTGATGACATCT ] [+] EMBL AI977577 [ TAACAAATGTATTGATGTATACAAATTAAGAAAAAACATTACAACCTGTGGACCAATACAACGTTACAGGCTTAGATAAGCAAAATAAATAAGAAATATAATTAGGTAGGTCTTTAGTAAAAACATCAACACAATCCAAATTTACAACTGTTAAAGGTTCACACAAATTAGATAAGATACTATTGATTTCTGTCAAAGGACAAGTACACTCATGAACAGCTATCAAAGAAGTAACACTCAACCTCTTTTGAATTGTTTTGATGACATCTAAAAGGTTATTTTTTCCATCGATTAAGTCATTATTTGTCATGAGTAACACAACAGCATTACCTGCGAATAAAATAAAAAATACAAGTTTCAAAACGAAAGTACAATTTTTAGGTTCGGATAGTAGCTTACAATCTATTACGAGCACGATTGGTCCAGTTGGTTTTATGCAAAGATGAGCGACTGGAATAAGGAGT ] [+] EMBL CD076399 [ AAATGTATTGATGTATACAAATTAAGAAAAAACATTACAACCTGTGGACCAATACAACGTTACAGGCTTAGATAAGCAAAATAAATAAGAAATATAATTAGGTAGGTCTTTAGTAAAAACATCAACACAATCCAAATTTACAACTGTTAAAGGTTCACACAAATTAGATAAGATACTATTGATTTCTGTCAAAGGACAAGTACACTCATGAACAGCTATCAAAGAAGTAACACTCAACCTCTTTTGAATTGTTTTGATGACATCTAAAAGGTTATTTTTTCCATCGATTAAGTCATTATTTGTCATGAGTAACACAACAGCATTACCTGCGAATAAAATAAAAAATACAAGTTTCAAAACGAAAGTACAATTTTTAGGTTCGGATAGTAGCTTACAATCTATTACGAGCACGATTGGTCCAGTTGGTTTTATGCAAAGATGAGCGACTGGAATAAGGAGTGTATCTTGTCTTTTTCCAGTAAGGAAAAGTTTCCCTGGACCTCCCAAAAACTTGCTATTGTAACGCATGAAGTATTTGAAGGCATCTTCTTTAATTGGAAAACCAGCTAA ] [-] EMBL CD064455 [ GTAACACTCAACCTCTTTTGAATTGTTTTGATGACATCTAAAAGGTTATTTTTTCCATCGATTAAGTCATTATTTGTCATGAGTAACACAACAGCATTACCTGCGAATAAAATAAAAAATACAAGTTTCAAAACGAAAGTACAATTTTTAGGTTCGGATAGTAGCTTACAATCTATTACGAGCACGATTGGTCCAGTTGGTTTTATGCAAAGATGAGTGACTGGAATAAGGAGTGTATCTTGTCTTTTTCCAGTAAGGAAGAGTTTCCCTGGACCTCCCAAAAACTTGCTATTGTAACGCATGAAGTATTTGAAGGCATCTTCTTTAATTGGAAAACCAGCTAAGGTTTCATTATCAAGCACCTCACTTTGGATTAATTCATAACCCTTGGTCATTGAACTAGCTTGGGCAGCACAAGCAGTAGAGATGACTGTACTTAATGTCTTATATAGTGTTCCACTGTTGTTCGTTTTTGATACCTCAG ] [+] EMBL CD117755 [ AGCTTACAATCTATTACGAGCACGATTGGTCCAGTTGGTTTTATGCAAAGATGAGCGACTGGAATAAGGAGTGTATCTTGTCTTTTTCCAGTAAGGAAAAGTTTCCCTGGACCTCCCAAAAACTTGCTATTGTAACGCATGAAGTATTTGAAGGCATCTTCTTTAATTGGAAAACCAGCTAAGGTTTCATTTTCAAGCACCTCACTTTGGATTAATTCATAACCCTTGGTCATTGAACTAGCTTGGGCAGCACGAGCAGTAGAGATGACTGTACTTAATGTCTTATATAGTGTTCCACTGTTGTTCGTTTTTGATACCTCAGTTGGAAAACATGATGATCCATTTAGTTCGAAAAGCCTTGTGTACATTGTCGCAGCCAGTTGGCGACTAGAAGCATTTACAAAAA ] [-] EMBL CD167075 [ TTGTAACGCATGAAGTATTTGAAGGCATCTTCTTTAATTGGAAAACCAGCTAAGGTTTCATTTTCAAGCACCTCACTTTGGATTAATTCATAACCCTTGGTCATTGAACTAGCTTGGGCAGCACGAGCAGTAGAGATGACTGTACTTAATGTCTTATATAGTGTTCCACTGTTGTTCGTTTTTGATACCTCAGTTGGAAAACATGATGATCCATTTAGTTCGAAAAGCCTTGTGTACATTGTCGCAGCCAGTTGGCGACTAGAAGCATTTACAAAAACGTTGTCCACACCTGACAGCAATAACATCTGGAAAAGTTGCCATACGATATTTGAATCTGTTTGCCATATATTGATCGCGAATTCATAGCTCAACGGACTAACTTCATTAGAT] [+] EMBL CD096639 [ CGACTAGAAGCATTTACAAAAACGTTGTCCACACCTGACAGCAATAACATCTGGAAAAGTTGCCATACGATATTTGAATCTGGTTGCCATA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||