These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9003#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 825 fasta sequence [CTACTCAGACAACGTGACCGGAATAGGACGCGGAAAAACCAATGTTACGGTTTTATTTGCT-C-TGGTCCTATATAATGTCAAAGCTACCAG-TTTTGCTAAAACGTTAGCTGATATGGGACACAAGCGAGTTAGAAAAAACCCTCGCATTTATCCAAAAGCAAAAGGAAAGTTTCTCAAAGTACGACAACCTACCCCAGTTGATCCAGTGGAAGATGCGCTTTCCAAAAAGTGGTGGGTTGATTATCGATTACAATATGAAGCCG-TCAGGAGTCTTTTTCAATATGAAATCTATCGTCATCAAATGGAAGCCATCTCTGCCTCACGAATAGATCATGAAACTGAACGTAATAGACGTCATGAGCTAACGGAAACGTGGAACAAAGAGACCTTTCTACTAGCCACAGATAAATT-TGAAAGGCTCCTAAAATCATTGGTTGATAAACAAACTGATAGACTAATTGATTTTCAAAATAAACAAGCAAAGTCGTCAGACAAATTAAAAGCTGACCTTGATGCAGTAGCTACATTAACTGGACAGATGA-TTACGGAAACAAATTTAGATGATAAAATTGACGAAATCATGAATTGTGATGTTGTTGATTATAACTTCGTGGTTGACCTCAGTGGTAATATTGTTCGAGGAACAAAACCAATTAACAACGAACTTCATAAAGTCGATGTAGAGGGAAATATACAGGAAGAACCTTTTTCTGCTACATCGTGAATCCTTGTAGAAAGTTTTTCTCACGTTCTCGGTCGTTTTTGTGCATGAGTATATTCGATAATTAGTACTATATATACTTTGTAAATATAAAAAATACACCC] [+] EMBL CD166181 [CTACTCAGACAACGTGACCGGAATAGGACGCGGAAAAACCAATGTTACGGTTTTATTTGCT C TGGTCCTATATAATGTCAAAGCTACCAG TTTTGCTAAAACGTTAGCTGATATGGGACACAAGCGAGTTAGAAAAAACCCTCGCATTTATCCAAAAGCAAAAGGAAAGTTTCTCAAAGTACGACAACCTACCCCAGTTGATCCAGTGGAAGATGCGCTTTCCAAAAAGTGGTGGGTTGATTATCGATTACAATATGAAGCCG TCAGGAGTCTTTTTCAATATGAAATCTATCGTCATCAAATGGAAGCCATCTCTGCCTCACGAATAGATCATGAAACTGAACGTAATAGACGTCATGAGCTAACGGAAACGTGGAACAAAGAGACCTTTCTACTAGCCACAGATAAATT TGAAAGGCTCCTAAAATCATTGGTTGATAAACAAACTGATAGACTAATTGATTTTCAAAATAAA ] [+] EMBL AA864167 [ AAAACCCAATGTTACGGTTTTATTTGCT CTTGGTCCTATATAATGTCAAAGCTGCCAGTTTTTGCTAAAACGTTAGCTGATATGGGACACAAGCGAGTTAGAAAAAACCCTCGCATTTATCCAAAAGCAAAAGGAAAGTTTCTC AAGTAGCACAcc ] [+] EMBL AI976423 [ ACGGTTTTATTTGCTAT TGGTCCTATATCATGTCAAAGCTACCAGTTTTTGCTAAAACGTTAGCTGATATGGGACACAAGCGAGTTAGAAAAAACCCTCGCATTTATCCAAAAGCAAAAGGAAAGTTTCTCAAAGTACGACAACCTACCCCAGTTGATCCATTGGAAGATGCGCTTTCCAAAAAGCGGTGGGTTGATTATCGATTACAATATGAAGCCG TCAGGAGTCTTTTTCAATATGAAATCTATCGTCATCACATGGAAGCCATCTCTGCCTCACGAATAGATCATGAAACTGAACGTAATAGACGTCATGAGCTATCGGAAACGTGGAACATAGAGACCTTTCTACTAGCCACAGATAAATTCAGAAAGGCTCCTAAACGCATTGGTTGATAAACAAACTGATAGACTAATTGATCTTCAA ] [-] EMBL CD060082 [ CCCCAGTTGATCCAGTGGAAGATGCGCTTTCCAAAAAGTGGTGGGTTGATTATCGATTACAATATGAAGCCG TCAGGAGTCTTTTTCAATATGAAATCTATCGTCATCAAATGGAAGCCATCTCTGCCTCACGAATAGATCATGAAACTGAACGTAATAGACGTCATGAGCTAACGGAAACGTGGAACAAAGAGACCTTTCTACTAGCCACAGATAAATT TGAAAGGCTCCTAAAATCATTGGTTGATAAACAAACTGATAGACTAATTGATTTTCAAAATAAACAAGCAAAGTCGTCAGACAAATTAAAAGCTGACCTTGATGCAGTAGCTACATTAACTGGACAGATGACCTACGCAAACAAATTTAGATGATAAAATTGACGGAATCATGAACTGTGATGTTGTTGATTATAACTTCGTGGTTG ] [+] EMBL CD060069 [ TGCGCTTTCCAAAAAGTGTTTTTTTGATTATCGATTACAATATGAAGCGGCGGGGGAGTCTTTTTCAATATGAAATCTATCGTCATCAAATGGAAGCCATCTCTGCCTCACGAATAGATCATGAAACTGAACGTAATAGACGTCATGAGCTAACGGAAACGTGGAACAAAGAGACCTTTCTACTAGCCACAGATAAATT TGAAAGGCTCCTAAAATCATTGGTTGATAAACAAACTGATAGACTAATTGATTTTTAAAATAAACAAGCAAAGTCGTCAGACAAATTAAAAGCTGACCTTGATGCAGTAGCTACATTAACTGGACAGATGA TTACGGAAACAAATTTAGATGATAAAATTGACCAAATCATGAATTGTGATGTTGTTGATTATAACTTCGTGGTTGACCTCAGTGGTAATATTGTTCGAGGAACAAAACCAATTAACAACCAACTACATAAAGTCGATGTAGAGGGAAATATACAGGAAGAACCTTTTTCTGCTACATCGTGAATCCTTGTAGAAAGTTTTTCTCACGTTCTCGGTCG TTTTGTG ] [+] EMBL CD078580 [ CAAGCAAAGTCGTCAGACAAATTAAAAGCTGACCTTGATGCAGTAGCTACATTAACTGGACAGATGA TTACGGAAACAAATTTAGATGATAAAATTGACGAAATCATGAATTGTGATGTTGTTGATTATAACTTCGTGGTTGACCTCAGTGGTAATATTGTTCGAGGAACAAAACCAATTAACAACGAACTTCATAAAGTCGATGTAGAGGGAAATATACAGGAAGAACCTTTTTCTGCTACATCGTGAATCCTTGTAGAAAGTTTTTCTCACGTTCTCGGTCGTTTTTGTGCATGAGTATATTCGATAATTAGTACTATATATACTTTGTAAATATAAAAAATACACC ] [-] EMBL CD073046 [ AAGCAAAGTCGTCAGACAAATTAAAAGCTGACCTTGATGCAGTAGCTACATTAACTGGACAGATGA TTACGGAAACAAATTTAGATGATAAAATTGACGAAATCATGAATTGTGATGTTGTTGATTATAACTTCGTGGTTGACCTCAGTGGTAATATTGTTCGAGGAACAAAACCAATTAACAACGAACTTCATAAAGTCGATGTAGAGGGAAATATACAGGAAGAACCTTTTTCTGCTACATCGTGAATCCTTGTAGAAAGTTTTTCTCACGTTCTCGGTCGTTTTTGTGCATGAGTATATTCGATAATTAGTACTATATATACTTTGTAAATATAAAAAATACACCC] [-] EMBL CD135369 [ AAGCTGACCTTGATGCAGGAGGTACATTAACTGGACAGATGA TTACGGAAACAAATTTAGATGATAAAATTGACGAAATCATGAATTGTGATGTTGTTGATTATAACATAAAGGTTGACCTCAGTGGTAATATTGTTCGAGGAACAAAACCAATTAACAACGAACTTCATAAAGTCGATGTAGAGGGAAATATACAGGAAGAA CTTTTTCTGCTACATCGTGAATCCTTGTAGAg ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||