These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9071#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 639 fasta sequence [CTCCTCACTCTCGTCCGTACCAGGGCAATGTACATTACCAACCCATATTTAGTTGGAGATCATATTTATATAATACTAATCAAAATATCTACCAGAAATATTTTTTTGTTTCTTTAAACATATGAATCATTCAATGGTCCTGATAAGAATACATAAAAATGACTAAGATTGTCTATAATTTTTTCTATGTCCAATTAGTTTACTGTATCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCA-CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA-TTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA-TTTCAATCTT-TAA-AGTTAGATCCATTAATCGCACCAATTTCATTGTTGGCAATGGAACTCCTTAAGTTAGAAGTTTTCTGCTTTAACTTTCAACCAAGAGTAAGACTGAATGATCATGAAAAGTGCTGAAACACGTTTATGCAAACAACGGTACATTTCACATTGGTTAACACTACTTGATTTTGATAAGTCTTGTTAATTGAACGCTAAATTGGGTTCCT] [+] EMBL CD152325 [CTCCTCACTCTCGTCCGTACCAGGGCAATGTACATTACCAACCCATATTTAGTTGGAGATCATATTTATATAATACTAATCAAAATATCTACCAGAAATATTTTTTTGTTTCTTTAAACATATGAATCATTCAATGGTCCTGATAAGAATACATAAAAATGACTAAGATTGTCTATAATTTTTTCTATGTCCAATTAGTTTACTGTATCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCA CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA TTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCTT TAA AGTTAGATCCATTAATCGCACCAATTTCATTGTTGGC ] [+] EMBL CD152224 [CTCCTCACTCTCGTCCGTACCAGGGCAATGTACATTACCAACCCATATTTAGTTGGAGATCATATTTATATAATACTAATCAAAATATCTACCAGAAATATTTTTTTGTTTCTTTAAACATATGAATCATTCAATGGTCCTGATAAGAATACATAAAAATGACTAAGATTGTCTATAATTTTTTCTATGTCCAATTAGTTTACTGTATCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCA CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA TTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA T ] [-] EMBL CD152210 [ TCTATAATTTTTTCTATGTCCAATTAGTTTACTGTATCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCA CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA TTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCTT TAA AGTTAGATCCATTAATCGCACCAATTTCATTGTTGGCAATGGAACTCCTTAAGTTAGAAGTTTTCTGCTTTAACTTTCAACCAAGAGTAAGACTGAATGATCATGAAAAGTGCTGAAACACGTTTATGCAAACAACGGTACATTTCACATTGGTTAACACTACTTGATTTTGATAAGTCTTGTTAATTAAACGCTAAATTGGGTT ] [-] EMBL CD152191 [ TTTCTATGTCCAATTAGTTTACTGTATCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTGTCAAACTACGATTTTCCA CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCAGTTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCTTGTAA AGTTAGATCCATTAATCGCACCAATTTCATTGTTGGCAATGGAACTCCTTAAGTTAGAAGTTTTCTGCTTTAACTTTCAACCAAGAGTAAGACTGAATGATCATGAAAAGTGCTGAAACACGTTTATGCAAACAACGGTACATTTCACATTGGTTAACACTACTTGATTTTGATAAGTCTTGTTAATTGAACGCTAAATTGGGTT ] [+] EMBL CD152218 [ tgGTGTCTAGAATCTCCGGTCATTGTTTCCGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCA CTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA TTACACAATTTTCAGCATTCATATCAGACAGTTCACAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCT ] [-] EMBL CD152262 [ CGTTCATTTTTAGCAGATAAGTTTAGCATATTCGAAATTCTTTTTCAAACTACGATTTTCCACCTATATTTGTTTCTCGTCATTCCGGAATATTCTCTTCA TTACACAATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATA TGACTTTCAATCTG TAAGAGTTAGATCCATTAATCGCACCAATTTCATTGTTGGCAATGGAACTCCTTAAGTTAGAAGTTTTCTGCTTTAACTTTCAACCAAGAGTAAGACTGAATGATCATGAAAAGTGCTGAAACACGTTTATGCAAACAACGGTACATTTCACATTGGTTAACACTACTTGATTTTGATAAGTCTTGTTAATTGAACGCTAAATTGGGTTCCT] [-] EMBL CD152221 [ gCAATTTTCAGCATTGAGATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCTT TAA AGTTAGATCCATTAATCGCACCAATTTCATTGTTGGCAATGGAACTCCTTAAGTTAGAAGTTTTCTGCTTTAACTTTCAACCAAGAGTAAGACTGAATGATCATGAAAAGTGCTGAAACACGTTTATGCAAACAACGGTACATTTCACATTGGTTAACACTACTTGATTTTGATAAGTCTTGTTAATTGAACGCTAAATTGGGTT ] [-] EMBL CD152254 [ AATTTTCAGCATTCATATCAGACAGTTCAAAATAACTCCAATTGCTTGAAATGAAACTTTTAATAACATTCATCATATTGA TTTCAATCTT TAA AGTTAGATCCcaactgg ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||