These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9589#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1795 fasta sequence [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTAGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATTGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC-TTCAA-ATGCTCCTCTAA-CACTTACTACCAATGTACCG-TTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGNGTTCTGTTTCAAAATCAAGCCCTCAAGCTTCGCCGACCTCGCGATTACGCTCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTAGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAAAGGATTTAATCTTGTTAAAGATGGCTCAACCGGTTTGTCGAAAGGTTACGCTTTTTGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA] [+] EMBL BF936362 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTTAATAATAAGGAAGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGT ] [+] EMBL AI976638 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTAGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATTGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC TTCAA ATGCTCCTCTAA CACTTACTA ] [+] EMBL BF936360 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGCCACATGTCCGGAGATAATTATACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCGGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCATTCGTGACCGTCGGCGACGTAGTAGA ] [+] EMBL AI976561 [ GCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTCGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATCGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC TTCCA ATGCTTCTCTTA CACTTACTACCAATGTACCGTTTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGNGTTCTGTT ] [+] EMBL CD068958 [ CATGCGTCCAACATGCTCCTCTAATCACTTACTACCAATGTACCG TTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGGGTTCTGTTTCAAAATCAAGCCCTCAAGCTTCGCCGACCTCGCGATTACGCTCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTAGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAA ] [+] EMBL CD059692 [ TCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTTGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAAAGGATTTAATCTTGTTAAAGATGGCTCAACCGGTTTGTCGAAAGGTTACGCTTTTTGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATACGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAAAAATACCTAGGCCAATTCCTGGAATTGAAATTCCTGGTGTCG ] [+] EMBL CD077770 [ TTTTCGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACA ] [+] EMBL CD133312 [ TGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTCATCTGTATA ] [-] EMBL AI395140 [ ATGATGAAGAATATGAAGATATAGTTGANGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA] [-] EMBL AI394776 [ GTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||