estimatetheta
PURPOSE 
ESTIMATETHETA - Estimate theta
SYNOPSIS
function [theta] = estimatetheta(aln,id)
DESCRIPTION
CROSS-REFERENCE INFORMATION
This function calls:
- thetaewen THETA_EWEN - Estimates theta (4N*mu) using formula 9.26 in Ewens' book
- thetapi THETA_PI - Average number of nucleotide differences
- thetaw THETAW - Watterson's theta
This function is called by:
- PGEGUI PGEGUI - PGEToolbox GUI
- pge_demo1 % PGEToolbox DEMO - Neutrality Tests
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