[BiO BB] (no subject) sequence searching mailing list?
dmb at mrc-dunn.cam.ac.uk
Fri Aug 22 11:55:53 EDT 2003
Sorry for not answering the question, but I was wondering
what the next step for the sequence search mailing list
should be? Should I start a project and use the mailing list?
P Sravan Kumar. PAsst said:
> Hello all,
> I have a query:
> When we are running psipred the program takes the file of a
> sequence as input , run and give result ;
> Ex: x.seq--> x.horiz,x.ss,x.ss2,x.blast: (3 iterations of PSIBLAST/PSIPRED V) : 3
> Actually I want to run psipred on a set of sequences loaded in a file at a time
> one by one.(Here the sequences will be in a file and should be read one by one.)
> Please provide me with a solution regarding the query and suggest me possible ways
> which will complete the task in a little time. May be at the rate of 1 or min for
> 50 sequences.
> A quick reply if possible is appreciated.
> Thank you all,
> Yours sincerely,
> P. Sravana Kumar
> c/o Dr. Shekhar C. Mande,
> Laboratory of Structural Biology,
> Center for DNA Fingerprinting and Diagnostics,
> ECIL Road,
> Nacharam 500 076,
> Ph: Lab: Direct: 040-27171442
> General: 040-27151344-1400
> e-mail: sravan at www.cdfd.org.in
> BiO_Bulletin_Board maillist - BiO_Bulletin_Board at bioinformatics.org
More information about the BBB