[BiO BB] DOTPLOTs

[Peter Rice]

Tucker, James wrote:
> Hi All,
> I am trying to carry out some dotplots on large seq (around 2.1 Mb). I would
> therefore appreciate it if any one could suggest any software that I can
> down load to carry this out, so as to avoid congesting up servers.

if you only need word-based matches, especially with a reasonably large 
word size) then EMBOSS http://www.emboss.org/ will do the job.

Hope this helps,

Peter