[BiO BB] How to calculate smithwaterman and z-scores while performing local alignment using smith-waterman algo..

[amal]

put the z-dscore in the array of the matrix of the  smith and then divide by the waterman and then align the algo .
  ----- Original Message ----- 
  From: prathibha bharathi 
  To: bio_bulletin_board at bioinformatics.org 
  Sent: Monday, January 12, 2004 4:02 PM
  Subject: [BiO BB] How to calculate smithwaterman and z-scores while performing local alignment using smith-waterman algo..


  Hi,
  can any body of you suggest me how to calculate z-score and smith-waterman score while performing local alignment using smith-waterman algorithm.

                                         ThankYou
                                         Prathibha 
  com bio <combiofriends at yahoo.com> wrote:
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