[BiO BB] Re: pdb-l: Extracting blocks of seq alignment

[Eric Pettersen]

Chimera's MultAlignViewer tool allows you to save subsections of an  
alignment.  That feature is described here:  
http://www.cgl.ucsf.edu/chimera/1.2038/docs/ContributedSoftware/ 
multalignviewer/multalignviewer.html#editing

You can get Chimera itself from: http://www.cgl.ucsf.edu/chimera

                         Eric Pettersen
                         UCSF Computer Graphics Lab
                         pett at cgl.ucsf.edu
                         http://www.cgl.ucsf.edu

On Nov 30, 2004, at 10:43 AM, Goel, Manisha wrote:

> Hi All,
>
> I have been looking for an alignment editor/ script that will extract  
> blocks of multiple sequence alignment (when given the residue numbers  
> etc.) from a longer multiple sequence alignment.
>
> Any suggetions will be helpful.
>
>  Thanks,
>  - Manisha Goel
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: text/enriched
Size: 1383 bytes
Desc: not available
URL: <http://www.bioinformatics.org/pipermail/bbb/attachments/20041130/ba537a70/attachment.bin>