[BiO BB] Extracting blocks of seq alignment

[Dr. Christoph Gille]

Hi all,

STRAP would work as well.

1. import of the Multiple sequ file (MSF or clustalw file).
2. Export and setting the alignment begin and end index.
Both is found in the file menu.


Warning: requires about 20 min for the intro tutorial.

http://www.charite.de/bioinf/strap/
Good look
Christoph


> Hi All,
>
>
> I have been looking for an alignment editor/ script that will extract
> blocks of multiple sequence alignment (when given the residue numbers etc.)
> from a longer multiple sequence alignment. Any suggetions will be helpful.
>
>
> Thanks,
> - Manisha Goel
>
>
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