[BiO BB] flybase IDs to gene bank accession nos
aloraine at gmail.com
Mon Jan 9 00:04:32 EST 2006
Maybe this will help...
Does FlyBase provide sequence data?
If you can get a mapping of FlyBase ids onto mRNA sequences, then you
can use blast to search against a database of RefSeq fruit fly mRNA
Then it should be relatively easy to get Entrez gene ids from the
perfect-match RefSeq ids identified in the blast search.
On 1/8/06, Liangyou Chen <liangyou at gmail.com> wrote:
> I am creating tools for such conversions. But I don't know how to
> connect the FlyBase ID to GeneBank accession or entrez ID. If you
> can show me an example how to do the conversion in detail, I will make a tool
> for you.
> On 1/6/06, Rami Reddy.V <reddy_vram at yahoo.com> wrote:
> > Hello all,
> > I am looking for a tool to convert FlyBase IDs to Gene Bank accession or
> > entrez IDs, if anybody knows please let me know.
> > Thanks alot
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Section on Statistical Genetics
University of Alabama at Birmingham
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