[BiO BB] Aligning sequence from pdb to an established MSA

Dr. Christoph Gille christoph.gille at charite.de
Fri Aug 31 13:06:59 EDT 2007

> HMM like HMMER can do this.

Is HMMER considering 3D information?

clustalw and Tcoffee are the two programs I knwow that
can align a sequence to an alignment.
But they just take the sequence and disregard 3D information.

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