[BiO BB] Aligning sequence from pdb to an established MSA
dtheobald at brandeis.edu
Fri Aug 31 13:05:34 EDT 2007
Many alignment programs can do it, like MUSCLE or even CLUSTALW.
On Aug 31, 2007, at 12:31 PM, Dan Bolser wrote:
> HMM like HMMER can do this.
> On 30/08/2007, Kai Ye <k.ye at lacdr.leidenuniv.nl> wrote:
>> Dear all:
>> Any idea about a linux program to align the sequence extracted
>> from pdb
>> an established MSA. In the MSA there may or may not be a sequence
>> to the one from pdb.
>> Thanks in advance!
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