[BiO BB] blast graphical result & gapped alignment

[Sowmiya Raj]

hi all,
I am developing a webserver using the standalone BLAST program. I am getting the results. I want to include the graphical results in the text result page(html). How do i go about it? Should i use any GD modules from PERL? And also, i am able to get only the ungapped results, but not the gapped results. though i have included the command  -g T -G 13 -E 3. Please let me know how to do gapped alignment.

regards
somya.

On Tue, 04 Dec 2007 sysadmins at bioinformatics.org wrote :
>Somya, we have a mailing list that is better for that question:
>
>  bbb at bioinformatics.org
>  http://bioinformatics.org/lists/bbb
>
>But please elaborate: what do you mean by "include the graphical results"?
>
>----------------
>How do i include the graphical results of blast in image format while building a web server using stand alone blast program?
>