[BiO BB] Global sequence alignments
skhadar at gmail.com
Mon Feb 19 22:52:15 EST 2007
Try MALIGN by M.S. Johnson and you can obtain the %ID from the alignment
If you dont have access to MAIGN, create ur alignment using any standard
tool and check the alignment statistics using ALISTAT (Part of Eddy's HMMER)
NCBS - TIFR
On 2/17/07, Raj <rajkumar.bondugula at gmail.com> wrote:
> Hello all,
> Can any one suggest me a downlodable program to perform global
> sequence alignment between two protein sequences and give me their
> sequence identity in percentage?
> Thank you for your time.
> General Forum at Bioinformatics.Org -
> BiO_Bulletin_Board at bioinformatics.org
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