[BiO BB] Weka exception: premature end of line

[Li Xue]

Hello all,
I am calling weka using command line in Window XP. But I get the 
following error report:

java.lang.Exception:
Weka exception: premature end of line, read Token[EOL], line 19585


My perl command is like this and it works for a smaller dataset:

system "java -mx1024m weka.classifiers.bayes.NaiveBayes -t $trainfile 
-T $testfile -p $probpos > $outputfile";


How can I fix that? Thank you.


Xue, Li
Bioinformatics and Computational Biology Program
Iowa State University
1-515-5201676