[BiO BB] Newbie question.[Scanned]

[Indranil Mitra]

I am working on novel technologies of drug delivery and how we can simulate the same.
If any body is working on the same or can give any more ideas I would be glad to discuss/collaborate.

Thank u!!!
Neil

-----Original Message-----
From: bbb-bounces at bioinformatics.org [mailto:bbb-bounces at bioinformatics.org] On Behalf Of Lambert, Lisa
Sent: Monday, January 07, 2008 6:26 AM
To: General Forum at Bioinformatics.Org
Subject: Re: [BiO BB] Newbie question.[Scanned]

I haven't tested the procedure myself, but a paper in 2006 in BMC Bioinformatics described a "machine learning approach." See Yan et al. 7:262. Good luck!

	-----Original Message----- 
	From: bbb-bounces at bioinformatics.org on behalf of Donnie Darko 
	Sent: Sun 1/6/2008 9:57 AM 
	To: bbb at bioinformatics.org 
	Cc: 
	Subject: [BiO BB] Newbie question.[Scanned]
	
	

	Hi folks,
	
	Suppose I have a novel gene whose product is a DNA binding protein, how
	would I go about locating potential binding sites where this protein could
	bind? I'm only interested in finding sites for this specific protein and not
	a general scan of tfbs.
	
	I've extracted upstream sequences of genes that I'm interested in but I
	can't think of a way forward.
	
	Cheers and belated happy new year :-P
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