[BiO BB] Pipeline Tool

[Ryan Golhar]

Can you plug in modules into Genious?  Its got a nice interface, but its 
not open-source, and there is a lot I'd love to add to it.

Rohan Sachdeva wrote:
> The program geneious does all of this... I'm not too sure about it's
> annotation features though.
> 
> On Oct 6, 2009, at 12:57 PM, Daniel Xavier de Sousa <danielucg at yahoo.com.br
>  > wrote:
> 
>> Hi Everybody,
>>
>>
>> I'm looking for a tool for run Genome Project. In other words, I
>> want a system web to submit chromatogram, and process on it bases
>> calling (PHRED), vector cleaning  (CROSS_MATCH), clustering (CAP3)
>> and annotation (BLAST) - PIPELINE. And I would like to see all data
>> on graphic interface.
>>
>> I have tried many others tools, as ESTWeb. But all them have
>> different problems: the project has finished, there is not support,
>> there is no lab using,...
>>
>> I have searched Google, Bioinformatics.ORG, ... But,I`m asking here
>> because I would like to get some one that there are labs using it.
>>
>> No matter if the tool is comercial (have to pay for it). I really
>> want resolve my problem of pipeline process.
>>
>>
>>
>> Can anyone, suggest one?
>>
>>
>> Thanks,
>> -Daniel Xavier de Sousa
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