[BiO BB] what is the best software/algorithm for miRNA targetprediction ?

[David Fernandez]

Dear Ilgar,

Depending on your kind of data, you could try miRanalyzer. Have a look at
http://web.bioinformatics.cicbiogune.es/microRNA/miRanalyser.php

Regards

David Fernández
Project Manager
fernandez at noraybio.com
www.noraybio.com
 
 
Noray Bioinformatics, S.L.U.
Parque Tecnológico 801 A, 2º
48160 Derio - BIZKAIA
T.+34 94 403 69 98   F.+34 94 403 69 99
 
     
-----Mensaje original-----
De: bbb-bounces at bioinformatics.org [mailto:bbb-bounces at bioinformatics.org]
En nombre de Ilgar Abdullayev
Enviado el: miércoles, 10 de febrero de 2010 21:55
Para: bbb at bioinformatics.org
Asunto: [BiO BB] what is the best software/algorithm for miRNA
targetprediction ?

Dear all,

I'm a master student who is trying to write a master thesis about 
predicting miRNA targets.  I was wondering if somebody could advise me 
the best software/algorithm for miRNA target prediction. Or the one that 
scientific community uses the most. 

I would really appreciate any kinds of help/advise.

Thanks in advance

Ilgar Abdullayev
Computational and Systems Biology
Royal Institute of Technology
Stockholm Sweden
Tel: +46 707 821 954

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