[BiO BB] proteins related to a particular disease/condition

[Maximilian Haussler]

I assume that you either have to read papers for this (google: microarray
hypoxia upregulated genes) and then get their supplemental data or do bit of
digging in NCBI GEO. Here is a hypoxia dataset in geo that I've found by
searching geo for hypoxia:

http://www.ncbi.nlm.nih.gov/projects/geo/query/acc.cgi?acc=GSE3188

I think nextbio has already processed the data in the way that you need but
it's a company and I don't know which part you can use for free is you're a
researcher:
http://www.nextbio.com/b/search/disc.nb?q=hypoxic#cat=Genes

good luck
Max
--
Maximilian Haussler
Tel: +447542993736 +447574054746
http://www.ls.manchester.ac.uk/people/profile/index.asp?id=4774



On Tue, Mar 9, 2010 at 6:34 AM, Pankaj Khurana <pkhurana08 at gmail.com> wrote:

> Hi all,
>
> I would like to get a list of all proteins that are
> upregulated/downregulated during hypoxia.
> How can I get a list of these proteins?
>
> Thanking all in advance
> Dr. Pankaj Khurana
> India
> _______________________________________________
> BBB mailing list
> BBB at bioinformatics.org
> http://www.bioinformatics.org/mailman/listinfo/bbb
>