[BioBrew Users] : how to run mpiblast

[Glen Otero]

On Jul 15, 2004, at 10:55 PM, kenix y wrote:

> What is the mpiformatdb command that you are running?
>
> /opt/BioBrew/NCBI/6.1.0/bin/mpiformatdb -f 
> /home/bigcpuguest/mpiblast.conf -N 2 -i /home/bigcpuguest/ecoli.nt -o 
> T -p F

How big is ecoli.nt and what happens when you try to format it with 
regular formatdb?
>
> How much space is on /mnt/pvfs?
> 4.1G
>
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Glen Otero, Ph.D.
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