[Bioclusters] mpiBLAST compile error

[Jones George]

Hello,

Does anyone know where I can get the complete NCBI ToolKit=20
that contains these header files:

xmlblast.h, mblast.h, objblst3.h, netblap3.h


Thanks,
Jones


>>> JBGeorge@wyeth.com 03/03/03 01:43PM >>>
Joe,

I found the RPM at:

http://rpmfind.net/linux/RPM/contrib/libc6/i386/ncbi-6.0-1.i386.html=20

I will try installing the direct toolkit.. will update on how it goes..

-Jones

>>> landman@scalableinformatics.com 02/28/03 05:22PM >>>
Hi Jones:

  Either from the direct toolkit, or I can craft a source RPM to go =
with=20
my binary RPMs (http://scalableinformatics.com/downloads/).  Where did=20
you get the blast RPM BTW?

Joe

Jones George wrote:
> Joe,
> Thanks for the clarification.
>=20
> I do not have this file on the system.. anywhere...
>=20
> i do not have: xmlblast.h, mblast.h, objblst3.h, netblap3.h
>=20
> I am trying to understand why they are not part of:
>=20
> ncbi-6.0-1 RPM...
>=20
> Maybe I need to reinstall install the toolkit from some other source..
>=20
> any recommendations?
>=20
> Thanks,
> jones
>=20
>=20
>=20
>=20
>>>>landman@scalableinformatics.com 02/28/03 04:56PM >>>
>=20
> Jones:
>=20
>    These are not libraries, but C header files.  On your system, try
>=20
> 	locate xmlblast.h
>=20
> and see if you see it anywhere.  If so, add a pointer to this file in=20
> your Makefile.
>=20
> 	-I/path/to/include/files
>=20
> along with the other paths that they have there for include directories.
>=20
> Joe
>=20
> --
> Joseph Landman, Ph.D
> Scalable Informatics LLC,
> email: landman@scalableinformatics.com=20
> web  : http://scalableinformatics.com=20
> phone: +1 734 612 4615
>=20
> Jones George wrote:
>=20
>>I understand.. but I installed the  RPM
>>and these 4 libs were not installed.
>>I cannot find them anywhere in the system.
>>
>>
>>
>>>>>landman@scalableinformatics.com 02/28/03 04:30PM >>>
>>
>>These files are located in  ncbi/include/ from the toolkit source.
>>
>>
>>
>>_______________________________________________
>>Bioclusters maillist  -  Bioclusters@bioinformatics.org=20
>>https://bioinformatics.org/mailman/listinfo/bioclusters=20
>>
>>_______________________________________________
>>Bioclusters maillist  -  Bioclusters@bioinformatics.org=20
>>https://bioinformatics.org/mailman/listinfo/bioclusters=20
>=20
>=20
>=20
> _______________________________________________
> Bioclusters maillist  -  Bioclusters@bioinformatics.org=20
> https://bioinformatics.org/mailman/listinfo/bioclusters=20
>=20
> _______________________________________________
> Bioclusters maillist  -  Bioclusters@bioinformatics.org=20
> https://bioinformatics.org/mailman/listinfo/bioclusters=20

--=20
Joseph Landman, Ph.D
Scalable Informatics LLC,
email: landman@scalableinformatics.com=20
web  : http://scalableinformatics.com=20
phone: +1 734 612 4615


_______________________________________________
Bioclusters maillist  -  Bioclusters@bioinformatics.org=20
https://bioinformatics.org/mailman/listinfo/bioclusters=20

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