[Bioclusters] mpiBLAST compile error

[Joe Landman]

ftp://ftp.ncbi.nlm.nih.gov/toolbox/ncbi_tools/ncbi.tar.Z

On Wed, 2003-03-05 at 14:08, Jones George wrote:
> Hello,
> 
> Does anyone know where I can get the complete NCBI ToolKit 
> that contains these header files:
> 
> xmlblast.h, mblast.h, objblst3.h, netblap3.h
> 
> 
> Thanks,
> Jones
> 
> 
> >>> JBGeorge@wyeth.com 03/03/03 01:43PM >>>
> Joe,
> 
> I found the RPM at:
> 
> http://rpmfind.net/linux/RPM/contrib/libc6/i386/ncbi-6.0-1.i386.html
> 
> I will try installing the direct toolkit.. will update on how it goes..
> 
> -Jones
> 
> >>> landman@scalableinformatics.com 02/28/03 05:22PM >>>
> Hi Jones:
> 
>   Either from the direct toolkit, or I can craft a source RPM to go with 
> my binary RPMs (http://scalableinformatics.com/downloads/).  Where did 
> you get the blast RPM BTW?
> 
> Joe
> 
> Jones George wrote:
> > Joe,
> > Thanks for the clarification.
> > 
> > I do not have this file on the system.. anywhere...
> > 
> > i do not have: xmlblast.h, mblast.h, objblst3.h, netblap3.h
> > 
> > I am trying to understand why they are not part of:
> > 
> > ncbi-6.0-1 RPM...
> > 
> > Maybe I need to reinstall install the toolkit from some other source..
> > 
> > any recommendations?
> > 
> > Thanks,
> > jones
> > 
> > 
> > 
> > 
> >>>>landman@scalableinformatics.com 02/28/03 04:56PM >>>
> > 
> > Jones:
> > 
> >    These are not libraries, but C header files.  On your system, try
> > 
> > 	locate xmlblast.h
> > 
> > and see if you see it anywhere.  If so, add a pointer to this file in 
> > your Makefile.
> > 
> > 	-I/path/to/include/files
> > 
> > along with the other paths that they have there for include directories.
> > 
> > Joe
> > 
> > --
> > Joseph Landman, Ph.D
> > Scalable Informatics LLC,
> > email: landman@scalableinformatics.com 
> > web  : http://scalableinformatics.com
> > phone: +1 734 612 4615
> > 
> > Jones George wrote:
> > 
> >>I understand.. but I installed the  RPM
> >>and these 4 libs were not installed.
> >>I cannot find them anywhere in the system.
> >>
> >>
> >>
> >>>>>landman@scalableinformatics.com 02/28/03 04:30PM >>>
> >>
> >>These files are located in  ncbi/include/ from the toolkit source.
> >>
> >>
> >>
> >>_______________________________________________
> >>Bioclusters maillist  -  Bioclusters@bioinformatics.org 
> >>https://bioinformatics.org/mailman/listinfo/bioclusters
> >>
> >>_______________________________________________
> >>Bioclusters maillist  -  Bioclusters@bioinformatics.org 
> >>https://bioinformatics.org/mailman/listinfo/bioclusters
> > 
> > 
> > 
> > _______________________________________________
> > Bioclusters maillist  -  Bioclusters@bioinformatics.org 
> > https://bioinformatics.org/mailman/listinfo/bioclusters
> > 
> > _______________________________________________
> > Bioclusters maillist  -  Bioclusters@bioinformatics.org 
> > https://bioinformatics.org/mailman/listinfo/bioclusters
-- 
Joseph Landman, Ph.D
Scalable Informatics LLC,
email: landman@scalableinformatics.com
web  : http://scalableinformatics.com
phone: +1 734 612 4615