Hello Joe, Getting a Module error. [root@opteron bbsv3rc1]# bbsrun --help Can't locate Object/MultiType.pm in ....... Was this Module compiled with bbs3? Doug Joe Landman wrote: >Folks: > > Much delayed as version 2 went through many rewrites, and we did not >release early or often. This will be corrected. > > http://scalableinformatics.com/BBS/ > >and > > http://bioinformatics.org/bbs > >(they are identical) > > Much is new in version 3. > >1) You no longer need to modify program source >to setup your benchmark. A simple XML input file will do. > >2) A number of examples are included. We need to document the >format better, though if you read the format, you will see >that it really isn't complex (this is what took so long >oddly enough) > >3) A bbsv1.xml input deck that replicates the original benchmarks from >last year is included. > >4) New baseline example tests have been created using HMMer, multiple >BLAST runs, and others. Further baseline tests will be added (and >suggestions are always welcome). We are looking at a number of codes >including ClustalW, and various chemistry and proteomics codes. > >5) Output in multiple formats: plain text, csv (comma separated values), >and XML. > >6) A dryrun option. Does everything but the final execution. Uses a >random sleep rather than a run. > >Much more code, some of it hinting at things to come. Quite scalable: >we ran 100 simultaneous tests on a laptop (learning some surprising >things about DBM and performance loss in the process). Documentation >has been created at least in the form of man pages. More documentation >should be available soon, with details of the formats, configuration, >and so forth > >The code is heavily commented. It is GPLed for GPL projects/products. >For commercial products which need to be non-GPL and supported efforts, >please contact us. > >Please give it a spin, and send us a note as to how you found it, what >else you might like on it, and what tests you would like to see. If you >want to contribute an idea for a test, or even better, a test, please >send a note. If you want to help out on coding, please send a note as >well. > >Thanks! > > >