[Bioclusters] re: how to run mpiblast

kenix y bioclusters@bioinformatics.org
Thu, 15 Jul 2004 14:28:57 +0800

>You will need to create one where you run mpiblast, and in your home 
Meaning that I need to create .ncbirc in /root, is that right?


Er, I'm not too sure where the weight matrices are, any way I can find out?

>Then edit the BLASTDB=../db line to point to the database (ecoli.nt in your 
As for ecoli.nt, I've just moved it to /tmp/blast
So the line should be
>You will need a copy of this in you home directory and in the directory you 
>run the mpiblast code.
As for the directory to run my mpiblast code, it can be anywhere? Or is 
there a specific location?

Thanks for all your help

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