[Bioclusters] (no subject)

[Glen Otero]

Did you run formatdb (mpiformatdb) in /mtn/pvfs? That will create the 
index files.

On Jul 18, 2004, at 11:32 PM, kenix y wrote:

> It seems that my earlier error was due to the fact that I forgot to 
> change the permission of /tmp/blast of my compute node, sorry for my 
> absent-mindedness.
> After I did, I got this:
>
> [blastall] WARNING: ftsYRP,: Could not find index files for database 
> /mnt/pvfs/ecoli.nt
> [blastall] WARNING: ftsYRP,: polARP,: Could not find index files for 
> database /mnt/pvfs/ecoli.nt
> [blastall] WARNING: ftsYRP,: polARP,: metKRPB,: Could not find index 
> files for database /mnt/pvfs/ecoli.nt
> [blastall] WARNING: ftsYRP,: polARP,: metKRPB,: dnaERP,: Could not 
> find index files for database /mnt/pvfs/ecoli.nt
>
> I do have the index files (.nhr, .nin, .nsq, .nsd, .nsi, .nni, .nnd) 
> in /mnt/pvfs, what else can I do?
>
>
> Thank you.
>
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Glen Otero, Ph.D.
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