[Bioclusters] mpiBLAST 1.4.0 release announcement
Aaron Darling
darling at cs.wisc.edu
Mon Jul 11 12:31:17 EDT 2005
The mpiBLAST team announces the availability of mpiBLAST 1.4.0
mpiBLAST 1.4.0 contains several critical enhancements to mpiBLAST's
performance, scalability, and stability. This release attained a 305x
speedup searching the nt database with 128 worker CPUs. The previous
fastest mpiBLAST release gives only 180x speedup on the same data set.
Other improvements include result ordering that matches NCBI's blastall
and a variety of bugfixes to features like database updating and database
removal.
We are also pleased to announce that the mpiBLAST web site has migrated
to a new wiki-based platform at http://mpiblast.org. The new site fuses
information that was previously scattered across several sites. Parts
of the site are directly editable using the PmWiki language.
Downloads of mpiBLAST 1.4.0 are available here:
http://mpiblast.org/pmwiki/pmwiki.php?n=Downloads.Stable
Installation instructions are here:
http://www.mpiblast.org/pmwiki/pmwiki.php?n=Docs.Install
And a more complete list of changes in 1.4.0 is here:
http://www.mpiblast.org/pmwiki/pmwiki.php?n=Downloads.Version-History
On behalf of our development team, I would like to personally thank
everybody who contributed code and submitted bug reports for this
release. Several new features in the mpiBLAST 1.4.0 release are based
entirely on your feedback and code contributions.
--The mpiBLAST Team
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