[Bioclusters] interpro queuing system

Bernard Li bli at bcgsc.ca
Mon Aug 28 15:11:48 EDT 2006


If we do not already have a SGE-Interpro HOWTO, perhaps it is time to
start one :-)

Thanks,

Bernard 

> -----Original Message-----
> From: bioclusters-bounces+bli=bcgsc.ca at bioinformatics.org 
> [mailto:bioclusters-bounces+bli=bcgsc.ca at bioinformatics.org] 
> On Behalf Of Chris Dagdigian
> Sent: Monday, August 28, 2006 12:06
> To: HPC in Bioinformatics
> Subject: Re: [Bioclusters] interpro queuing system
> 
> 
> In many cases LSF is actually simpler to set up and configure than  
> any of the competing systems (from an administrators view).
> 
>  From the perspective of Interpro integration it may be a different  
> story, of course! I believe that there are a few people on this list  
> using the SGE (Grid Engine) queuing system with Interpro.  Perhaps  
> they can lend a hand? You can find more information about 
> grid engine  
> online at http://gridengine.sunsource.net
> 
> Also, a google search for "sge+interpro" yields some interesting hits.
> 
> 
> 
> -Chris
> 
> 
> 
> On Aug 28, 2006, at 10:49 AM, Michael Gang wrote:
> 
> > Dear all,
> > I want to run interpro on an linux cluster.
> > We are trying to setup interpro with the queuing system qsub.
> > Is there another queuing system which is easier to setup (other  
> > than LSF) ?
> >
> > Thanks in advance,
> > Michael
> > _______________________________________________
> > Bioclusters maillist  -  Bioclusters at bioinformatics.org
> > https://bioinformatics.org/mailman/listinfo/bioclusters
> 
> _______________________________________________
> Bioclusters maillist  -  Bioclusters at bioinformatics.org
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> 


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