[Bioclusters] interpro queuing system
Bernard Li
bli at bcgsc.ca
Mon Aug 28 15:11:48 EDT 2006
If we do not already have a SGE-Interpro HOWTO, perhaps it is time to
start one :-)
Thanks,
Bernard
> -----Original Message-----
> From: bioclusters-bounces+bli=bcgsc.ca at bioinformatics.org
> [mailto:bioclusters-bounces+bli=bcgsc.ca at bioinformatics.org]
> On Behalf Of Chris Dagdigian
> Sent: Monday, August 28, 2006 12:06
> To: HPC in Bioinformatics
> Subject: Re: [Bioclusters] interpro queuing system
>
>
> In many cases LSF is actually simpler to set up and configure than
> any of the competing systems (from an administrators view).
>
> From the perspective of Interpro integration it may be a different
> story, of course! I believe that there are a few people on this list
> using the SGE (Grid Engine) queuing system with Interpro. Perhaps
> they can lend a hand? You can find more information about
> grid engine
> online at http://gridengine.sunsource.net
>
> Also, a google search for "sge+interpro" yields some interesting hits.
>
>
>
> -Chris
>
>
>
> On Aug 28, 2006, at 10:49 AM, Michael Gang wrote:
>
> > Dear all,
> > I want to run interpro on an linux cluster.
> > We are trying to setup interpro with the queuing system qsub.
> > Is there another queuing system which is easier to setup (other
> > than LSF) ?
> >
> > Thanks in advance,
> > Michael
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