[Bioclusters] Parallel Bioinformatics Applications

intikhab alam ialam at cs.man.ac.uk
Mon Jun 19 08:58:39 EDT 2006


mpiblast and clustalw-mpi are good options for the kick start. You could later install a 
bunch of bioinformatics applications as interproscan 
(http://www.ebi.ac.uk/InterProScan/) which is not mpi based but requires a queuing 

Best Wishes,

Intikhab Alam

----- Original Message ----- 
From: "Gul Aftab" <gulaftab at gmail.com>
To: <bioclusters at bioinformatics.org>
Sent: Monday, June 19, 2006 10:50 AM
Subject: [Bioclusters] Parallel Bioinformatics Applications

: Hi All!
:       Recently we have built a computational cluster in our
: university for academic research purpose. It is a linux based cluster
: performing at 245 GFlops/sec. Now i want to run some real life
: applications specially bioinformatics applications. Can anyone suggest
: some applications (Parallel linux applications) which i can run on my
: cluster.
: Thanks,
: Gul Aftab
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