[Bioclusters] Re: [Xgrid] debugger

lijo skb lijo.skb at gmail.com
Mon Oct 15 23:56:52 EDT 2007


Hi,

Is there any open source OS, comes exclusively for synthetic biology?, I
know it involves engineering much, but ideas were baked in Computerese
before its implementation.Synthetic biology will really need HPC in very
near future.


Lijo
On 10/9/07, Harry Mangalam <harry.mangalam at uci.edu> wrote:
>
> I haven't used it for this purpose but I saw it demo'ed at OSCON this
> year and it was pretty impressive:  the Eclipse Parallel Tools
> Platform. It includes some of the tools I use for debugging/profiling
> and the implementation is pretty good.
>
> Java/Enormous/OSS/impressive
>
> http://www.eclipse.org/ptp/
>
>
> On Tuesday 09 October 2007, Scott Brunza wrote:
> > I've been dabbling with Xgrid and open-MPI (C/C++) for the last
> > number of months, and am curious if there are any recommended
> > debuggers for parallel apps.  Can the Xcode debugger grok MPI?
> > I've seen TotalView and a few other commercial parallel debuggers,
> > but they cost $$$$.  I'm looking for something that will handle
> > parallel code for little to no cost.  Open source?
> >
> > Thx,
> > Scott
> >
> >
> > --- Let us all bask in television's warm glowing warming glow ---
> > Scott Brunza           860.326.3637         scottso at sonalysts.com
>
>
>
> --
> Harry Mangalam - Research Computing, NACS, E2148, Engineering Gateway,
> UC Irvine 92697  949 824 0084(o), 949 285 4487(c)
> harry.mangalam at uci.edu
> _______________________________________________
> Bioclusters maillist  -  Bioclusters at bioinformatics.org
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>



-- 
Lijo


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