[Bioclusters] Re: new on using clusters: problem running mpiblast
(2)
Zhao Xu
xuzh.fdu at gmail.com
Sun Sep 9 21:41:28 EDT 2007
> > export CC=/opt/openmpi.gcc/bin/mpicc
> > export CPP=/opt/openmpi.gcc/bin/mpicxx
> > ./configure --with-ncbi=/home/share/src/ncbi --prefix=/opt/local
> --with-mpi=/opt/openmpi.gcc
I think you should do:
export CC=mpicc
export CXX=mpicxx
and, in my Makefile, I noticed that variable CPP was set to 'mpicc
-E',like this:
CPP= mpicc -E
XU Zhao
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