[Bioclusters] Re: new on using clusters: problem running mpiblast (2)

Zhao Xu xuzh.fdu at gmail.com
Sun Sep 9 21:41:28 EDT 2007

> > export CC=/opt/openmpi.gcc/bin/mpicc
> > export CPP=/opt/openmpi.gcc/bin/mpicxx
> > ./configure --with-ncbi=/home/share/src/ncbi --prefix=/opt/local
>    --with-mpi=/opt/openmpi.gcc

I think you should do:
export CC=mpicc
export CXX=mpicxx
and, in my Makefile, I noticed that variable CPP was set to 'mpicc
-E',like this:
CPP= mpicc -E

XU Zhao

More information about the Bioclusters mailing list