[Bioclusters] bio data mirroring

Itay M itaymen at gmail.com
Tue Jan 15 15:31:31 EST 2008


Hi David,
I would like to have more info about the concept of this interesting
software.
Thanks,
Itay M
Tel-Aviv University

On Jan 14, 2008 5:50 PM, David Allouche <David.Allouche at toulouse.inra.fr>
wrote:

> hi every body
>
> we strongly think that  public data  must  be  synchronize with a public
> software.  so , ...
>
> with 2 others  french academic lab, we develop a dedicate free ( gnu)
> software for
> large scale bio Data synchronization and post processing.
>
>  the application is stable and used from several month by all 3
> partners lab for synchronization and post-process various bio data bank.
> ( arround 100 workflow have been done )
>
> data post-processing script are also available (in beta - test)  for
> blast , srs , gcg , cdhit, emboss.  after data transfert and data
> uncompressing.
>
> depending one script some post-process are compliant with remote
> execussion on pbs or sge.
> ( if  you use data sharing between all cluster nodes  with nfs ,or other
> cluster fs )
>
> we are looking for  more beta-test for feed back. ( publication is going
> to be submit very soon).
>
>
> the software is open , it's easy to integrate home made script.
> in near future -end of year-, we will provide a  torrent release.
>
> if you are intressed , please let me know
> i ll send you  url web site.
>
>
> regards david
>
>
>
>
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>



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