[Genquire-users] problem viewing contigs

Danny Yoo dyoo@acoma.Stanford.EDU
Thu, 3 Jan 2002 11:58:58 -0800 (PST)


Hi everyone,


I'm trying to see if I've installed Genquire properly.  After using the
bulk_parse_contigs.pl file on the arabidopsis XML files, I now see the 5
chromosomes in a window titled "thale cress".

The contigs appear to be loaded, as mousing over any contig displays a
name under the GenquireII status bar.  However, double clicking on any
contig raises exceptions:

###
DBD::mysql::st execute failed: Column 'start' cannot be null at
GQ/Server/DB/Context.pm line 584.
GQ::Server::DB::Context::_look_lock at GQ/Server/DB/Context.pm line 584
GQ::Server::DB::Context::lock at GQ/Server/DB/Context.pm line 558
GQ::Client::QueryScreen::createSeqCanvas at GQ/Client/QueryScreen.pm line
965
GQ::Client::QueryScreen::openMainWindows at GQ/Client/QueryScreen.pm line
875
GQ::Client::QueryScreen::__ANON__ at GQ/Client/QueryScreen.pm line 839
(command bound to event)
###


Is this supposed to happen?