Revision
159 -
Directory Listing
Modified
Mon Jan 30 22:38:08 2012 UTC
(12 years, 8 months ago)
by
gpertea
wip
Revision
158 -
Directory Listing
Modified
Sun Jan 29 19:42:10 2012 UTC
(12 years, 8 months ago)
by
gpertea
Revision
157 -
Directory Listing
Modified
Fri Jan 27 22:33:06 2012 UTC
(12 years, 8 months ago)
by
gpertea
added index writing to GBamWriter
Revision
154 -
Directory Listing
Modified
Tue Jan 24 02:29:21 2012 UTC
(12 years, 8 months ago)
by
gpertea
massive update with Daehwan's work
Revision
140 -
Directory Listing
Modified
Thu Dec 15 22:40:48 2011 UTC
(12 years, 9 months ago)
by
gpertea
Revision
139 -
Directory Listing
Modified
Thu Dec 15 22:36:13 2011 UTC
(12 years, 9 months ago)
by
gpertea
spliceCigar() implemented, needs testing
Revision
138 -
Directory Listing
Modified
Wed Dec 14 22:58:39 2011 UTC
(12 years, 9 months ago)
by
gpertea
Revision
137 -
Directory Listing
Modified
Wed Dec 14 22:58:22 2011 UTC
(12 years, 9 months ago)
by
gpertea
wip spliceCigar() in bwt_map.cpp needs testing
Revision
135 -
Directory Listing
Modified
Mon Dec 12 22:28:38 2011 UTC
(12 years, 9 months ago)
by
gpertea
wip - SplicedSAMHitFactory() still not implemented
Revision
111 -
Directory Listing
Modified
Tue Oct 25 17:05:09 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip
Revision
97 -
Directory Listing
Modified
Thu Oct 6 19:45:36 2011 UTC
(13 years ago)
by
gpertea
by default bam2fastx shows unmapped only
Revision
70 -
Directory Listing
Modified
Tue Sep 20 19:32:58 2011 UTC
(13 years ago)
by
gpertea
wip : spliceCigar()
Revision
69 -
Directory Listing
Modified
Mon Sep 19 21:00:41 2011 UTC
(13 years ago)
by
gpertea
wip - implementing SplicedSAMHitFactory::get_hit_from_buf()
Revision
68 -
Directory Listing
Modified
Mon Sep 19 20:09:26 2011 UTC
(13 years ago)
by
gpertea
first attempt at accepting different Color qvlen in prep_reads
Revision
67 -
Directory Listing
Modified
Mon Sep 19 19:39:49 2011 UTC
(13 years ago)
by
gpertea
fixed segment_juncs to work with .bam files
Revision
37 -
Directory Listing
Modified
Mon Aug 22 16:17:34 2011 UTC
(13 years, 1 month ago)
by
gpertea
wip
Revision
35 -
Directory Listing
Modified
Fri Aug 5 18:47:20 2011 UTC
(13 years, 2 months ago)
by
gpertea
wip
Revision
34 -
Directory Listing
Modified
Wed Aug 3 22:15:52 2011 UTC
(13 years, 2 months ago)
by
gpertea
wip segment_juncs
Revision
33 -
Directory Listing
Modified
Wed Aug 3 17:02:56 2011 UTC
(13 years, 2 months ago)
by
gpertea
wip conversion to SAM processing
Revision
32 -
Directory Listing
Modified
Tue Aug 2 22:04:47 2011 UTC
(13 years, 2 months ago)
by
gpertea
adding bam2fastx as recognized unpacker for .bam files
Revision
31 -
Directory Listing
Modified
Tue Aug 2 21:58:18 2011 UTC
(13 years, 2 months ago)
by
gpertea
trying to get rid of unspliced_bwt in Maps (replace by unspliced_sam)
Revision
30 -
Directory Listing
Modified
Tue Aug 2 21:25:50 2011 UTC
(13 years, 2 months ago)
by
gpertea
added SeqAn to tophat source pack
Revision
29 -
Directory Listing
Modified
Tue Aug 2 21:24:54 2011 UTC
(13 years, 2 months ago)
by
gpertea
adding tophat source work
Revision
28 -
Directory Listing
Added
Tue Aug 2 21:23:26 2011 UTC
(13 years, 2 months ago)
by
gpertea
adding tophat_cpp dir
